Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02365 ATGTCTCTTGGGTATGCCGAGAAGCTTTCCTACATAGAAGATGTGGGCAACGTTGGAATGGTCGAATACTTCGACCCATCTCACGTTTTGCGAGAGAAACTTGTGTCTGCAGGGTGCTACTTGGAGAGGCCCTTCTTTGCCATGAATTTATGCTTGTGTTTGTTGTTGTTATCTGCTGCTAAAAAGAATGGCCTTAATTTAATGATAGATCAACTTGCTATTATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACAGGAGCAGGAATATCAACTTCATGTGGTATACCTGATTTTCGAGGGCCCAAGGGAATATGGACGCTTCAGCGAGAAGGTAAAGCCTTGCCTGAAGCATCATTGCCATTTCACCGCGCAGCACCAAGTTTGACACACATGGCTTTGGTTGAATTAGAAAAGGTTGGCATTTTGAAGTTCGTCATCAGTCAGAATGTTGATGGTCTCCATCTTCGATCTGGAATACCAAGGGAGAAACTAGCTGAATTGCATGGGAACTCCTTCATGGAGGTGTGCCCTTCTTGTGGAGAAGAGTACTTTCGTGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACATCAAGGCGTTGTACAGTATCCAAATGTGGGACAAGACTTAAGGATACTGTCCTTGACTGGGAGGATGCATTGCCTCCAAAGGAGATGAATCCTGCTGAGAAGCACTGTAAACAGGCAGATATAGTGTTATGTTTGGGTACAAGCTTACAAATAACTCCAGCATGCAACTTGCCTCTGAAAGCACTTCGTGGTGGGGGTAAAGTTGTTATTGTAAATCTCCAGTCCTTGGCTGTACCATACCATGTAATAGATCTTTGGCTTGGCTGTTACAATAAGCTTATGCATGTTGCAAAAAAAACTCCAAAGGACAAAAAAGCCAGCTTAGTCATACATGGGTTTGCAGATAAGGTAATTGCGGATAAAAGATATGTGAACTGGACTCTCCAGATTGCCAGTGTTCATGGACAAAGAGCCGCATTGCCTTTCATTGAGTCTGTTGAGGTCTCCTTCTTGGACAGGGAAGATTACAAAGCAGCCATTCTAGATAAGCAACCATTTCGGCTTAAAAGGAGAACAGCGTATAACAAAGCATTTGAAATGGTTCTGAAACTCAACTTCAGTGATGGCTGTGGTTGCTCATCCCTTGAAATTGATGTCCCTGTTGATTTTAAAGTTTCAACTGACTGCTTTGTCTTTGAAAAGGACTACATATTCCAAAAGCTGAGAGACAAGGCAGTTCTTGAATCAAGATGTGGTCAGAATGGTGTTATTGAGAGAAAGACCATTTTGACACCTAGAAGTGATGTCACTACCTATGCCATTGTGACCAATGTTGTTCAGTACAGCAAAACATGTAAAGCAGCCCTTGATTCTGTAAGTAATGGTGATCTTAAAAAAAGAAAAGCTAGTGTGACAGGTACAGGATCATCTAGGAAGCGTTCAAAAGGGTCTTCCAAGTGTAAATCCAGATCAGGTGTTCTTGGTGTGGCTATTGGAATGTTTCTATTATGA 1545 0.4181 MSLGYAEKLSYIEDVGNVGMVEYFDPSHVLREKLVSAGCYLERPFFAMNLCLCLLLLSAAKKNGLNLMIDQLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAAPSLTHMALVELEKVGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEVCPSCGEEYFRDFEVETIGLKETSRRCTVSKCGTRLKDTVLDWEDALPPKEMNPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQSLAVPYHVIDLWLGCYNKLMHVAKKTPKDKKASLVIHGFADKVIADKRYVNWTLQIASVHGQRAALPFIESVEVSFLDREDYKAAILDKQPFRLKRRTAYNKAFEMVLKLNFSDGCGCSSLEIDVPVDFKVSTDCFVFEKDYIFQKLRDKAVLESRCGQNGVIERKTILTPRSDVTTYAIVTNVVQYSKTCKAALDSVSNGDLKKRKASVTGTGSSRKRSKGSSKCKSRSGVLGVAIGMFLL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02365 514 Gene3D - 71 276 - -
Vimu2g02365 514 Gene3D - 170 219 - -
Vimu2g02365 514 FunFam NAD-dependent protein deacetylase sirtuin-6 isoform X2 71 169 - -
Vimu2g02365 514 ProSiteProfiles Sirtuin catalytic domain profile. 62 325 IPR026590 -
Vimu2g02365 514 CDD SIRT7 80 310 - -
Vimu2g02365 514 SUPERFAMILY DHS-like NAD/FAD-binding domain 60 294 IPR029035 -
Vimu2g02365 514 PANTHER NAD-DEPENDENT HISTONE DEACETYLASE HST4 69 287 - -
Vimu2g02365 514 MobiDBLite consensus disorder prediction 478 499 - -
Vimu2g02365 514 FunFam NAD-dependent protein deacetylase SRT1 170 219 - -
Vimu2g02365 514 Pfam Sir2 family 87 110 IPR003000 GO:0070403
Vimu2g02365 514 Pfam Sir2 family 121 251 IPR003000 GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02365 Vimu-Chr2 19208193 19222209 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02365 K11416 - gmx:100803586 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02365 2 19208193 19222209 Vimu2g02365 2 19208193 19222209 ECH