Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g02303 ATGCATCTCTACAATGCATGGCTTCCGCCGCCGGTCGCCGCTCAGACAGCCGCGGAGCGCGACTCCTTCACTCGCGTCATCGCCGCCGTCAAGTCCTCCTTCCGACCTGACGATCCCGAATCCGTCTTCTCCACTCTCAAATTCATATCCGTCCTCGACCTGTTTTTCGTGCTTGCGCCGTTAGGAAATGCTGTTGAATTTGTGATCGGAGGTTTCGAAGGAGTTAGTAAAACGTTGAGGAGTGTGAGATTCATGAAGGTTGGGAAGAAGTTAGTTAAAGGCTTAGGTGTTGAGAATCGTGGTTTTGTGACCAGTTTTGCAAAGTATGTGAACGGAAGGATAGTTCCGGAGAGTGCTGGATTGACTTCGTTTATAATTGCAAAAAGTGATGTTTCTTTGGAGGATGTTCGCGACCTTGCTCAGATGGGCCTTGAGATATTTCATGTTGCCAGTAATAAGCTTTATGCTCAGGGGATTTTGAATTATATTCCCGTTGCAGAAGTACAGGTCCAGAAGTCCTGCCGGAGATTCTTCCCATCAGGTTCTGCCTTTGAGATATGGTCTGAGTTTAAATCTTTGTTGCAAAACCCGTGGCATAATTCATCCTTTGAAGGTTCAGGCTTTGCAAGACTCTTTCTCCCAACAAATCTGGATAATGAGGCCTTTTTTACCCATGATTGGATAACAGAGTGTATAGACTTGTGGGAATCTATACCAAATTGCCAATTCTGGAACAATCAATGGGCAGATGTCATAGCTCGTGTTGTAAAAAATTACCACAATGTTGACTGGGACTGCTTCTTGCCTTTGCTTTTTGCTAGATACTTGAATATGTTTGAGATTCTAGAACTGAGCCTCTTTAGAAGAGACCAGTGTCCAAGAGTGAGGCACATGACTGTGACTTGGAGCCACACTACTCTGATTGTCTCAGTAGATAATAGGGGTTCTGGTAAAAGAGACAGGCATCTCAGGGTGGCTGTCTATCATCCACATCAAATGCCCAAGCAGCATCGAAGTGTACCTGTTGCAAATGGAAGTGGTTCACACCCCTTTTCTCTAGATGTCCCAAGAAACACTAGGTTCTTGTTCTCTAATAAAACTTCTACTCCTACAAAGGCAATCTCGAAATCAATAGTAAGCAAATATGTTGTTATTACTTCTGTATATTTACTAAAACCTGGTAGTCCATCACAGCAGCACTTTGAAAAATTGATCAACATTTTGGAACAGTTTATATTATCATCCCTCAAACGGGGGTCGATGGACCTACTCCTTGGAGCGGCTTTTGTTTCATTTGGTGTTTCAATTTCAAAAGCGAGCACAAATAATAGAAGACCCAGTGAACAGCATCTTGGGGAATCAGAGAGGGTTTTCTTTGTTAATTCAGTGCTTAAGTTAATTGACCGTGGTCAATACAGCAAGAATGAACATCTCTCTGAGACAGTTGCTGCAGCCACTTCTATACTGTCCTATGTAGAACCCTCATTGGTTCTGCCATTTGTGGCATCTCGGTTCCATATGGCCCTTGAGACGATGACTGCCACCCACCAGTTGAAAATTGCAGTTATGTCAGTGGCATTTGTTGGGCGTTCTCTGTTTTATACATCTGTATCAGCTTGCTCCACGAAGCCAGTTGATCTTGGTGTTGATCTTGTGGGGGTTTCATTATCTAATGCATTACTTGGCATGGATGCTAATGACCCTCCAAAAACCTTGGCTACCATGCAATTAATTGGTTCCATATTTTCAAACTTGGCTTTATTGGATGATAAAATTGATGACCTATCATTTATGCCTATGGTCCGCTTTTCAGAGTGGCTGGATGAGTTCTTATGCCGTCTGTTTTCCTTACTTCAACACTTGGAACCCAGCAGTGTTATAAATGAAGGTCTGCAGTCATCAGCAACAACAGGAACTTTCCTAGTTGATGATGGTCCATACTACTTCTGTGTGCTTGAAATTCTGTTTGGGAGGCTTTCTAATTCACTGTATAATCAGGCTCTGAAGAAAATTTCCAACTTTGTGAAGACAAATATTCTTCCTGGTGCTGTTGCAGAGGTAGGACTGCTCTGTTGTGCCTGTGTTCACTCGAACCCAGAAGAAGCAGTTAGTCAACTTGTTGAGCCAATATTACTTTCTGTGATATCTTCTTTGAAAGGAACACCACGCACTGGATTTGGAGGAGGAGGAACTTTTGAGGCTTCTGCTTCATCCAAGGCACCTTTCTTGGTTAGGTCCACAATTTCACCAGCTCTTGAGGCTGCAATTGACTATCAACTTAAGATATTGTCAGTTTGCATCACATATGGAGGTCCAGCACTCCTTCGCTACAAGGCTCAATTCAAAGAAGCTGTCTTCTTTGCTTTTGACTCACCATCTTGGAAGGTTAATGGGGCTGCTGATCATCTTCTTCGGTCTCTTCTAGGAAGTCAGATTCATTATTATCCAATTGATCAGTATAATCACCCTGATGCTGTTGCCCTTGAAGAATGGATTAGCACAAAAGGTTTTTCCACTGAGGAAAGCTTTATCCCAAAATGGCATATTCCATGTGATGAAGAAATTCATTTTGCAAATGAGCTAATAGACATTCACTTCCAGTCAGCTTTGGATGATCTGTTGAAAATATGCCAGTCTAAAATCCATGCAGACCAAGGGGATGAGAAAGAGCACTTGAAAGTGACTCTTCTACGTATTGAATCAACATTGCAAGGACTTTTTTCATGTTTGCCTGACTTTGTTCCAAACTCTAGAAATGGAACGAGTGAAGATTCAAGCAATCTGTTTTTAATTGCTGGGGCAACAGGTTGTACTGTTGGCAGTACTGCTCTGAGAGAAAAGGCTGCTGAGATTATACATATAGCCTGCAAATATGTCCTGGAGAAAAAATCAGATGACAGCATTCTGTTGATACTGATTATTCGCATCATTGATGCTTTAGGAAACTATGGTACCAACTTCTGTGGCGGAATAAGGAGTTTGGAATTTGATGAGTGGTCTAGTCATAGACAGGCTTGGAAATTAGAATCTGCTGCCATAATAGAACCACCCATTAATTTCATTGTATCATCTCATTCTAAAGGAAAGAAAAGACCAAGGTGGGCACTTATCGACAAGGCATTTATGCACAGTACCTGGAGGTCTTCGCAAGCATCTTATCATCTTTACCGTACAAGTGGGAATTTCTGCCCATCTGATCATGTGACTATTTTGATGGACGATTTGCTGACTCTCTCGCTGCATAGCTATGAAACTGTTCGCCTGTTAGATCTCGATGCTGAGGAATATGCAGTCTTGGGTTCTTGTTCAGTCCTTGCCTCACAAACAGTTCTCAAACATCTGACAACGGATCCGAAGTCATTTTCTTCATTTATCTTGGCAATTCTTTCAAGTTCTCATCATGAATCCTTGAAAGCTCAGAAAGCAATTAATGAGCTTTTTGTGAAGTACAACATTCAATTTTCTGGAGTATCTAGAAGCTTCTTCAGGATCTCAGACAAAGAAAATCAAACTGGTGGACTGGGGTTTTCAGATTTGGTTTCTCAGATTGGTTCAATGAGTTTTGATTCTACTGGCTTGCATTGGAGGTAA 3591 0.4202 MHLYNAWLPPPVAAQTAAERDSFTRVIAAVKSSFRPDDPESVFSTLKFISVLDLFFVLAPLGNAVEFVIGGFEGVSKTLRSVRFMKVGKKLVKGLGVENRGFVTSFAKYVNGRIVPESAGLTSFIIAKSDVSLEDVRDLAQMGLEIFHVASNKLYAQGILNYIPVAEVQVQKSCRRFFPSGSAFEIWSEFKSLLQNPWHNSSFEGSGFARLFLPTNLDNEAFFTHDWITECIDLWESIPNCQFWNNQWADVIARVVKNYHNVDWDCFLPLLFARYLNMFEILELSLFRRDQCPRVRHMTVTWSHTTLIVSVDNRGSGKRDRHLRVAVYHPHQMPKQHRSVPVANGSGSHPFSLDVPRNTRFLFSNKTSTPTKAISKSIVSKYVVITSVYLLKPGSPSQQHFEKLINILEQFILSSLKRGSMDLLLGAAFVSFGVSISKASTNNRRPSEQHLGESERVFFVNSVLKLIDRGQYSKNEHLSETVAAATSILSYVEPSLVLPFVASRFHMALETMTATHQLKIAVMSVAFVGRSLFYTSVSACSTKPVDLGVDLVGVSLSNALLGMDANDPPKTLATMQLIGSIFSNLALLDDKIDDLSFMPMVRFSEWLDEFLCRLFSLLQHLEPSSVINEGLQSSATTGTFLVDDGPYYFCVLEILFGRLSNSLYNQALKKISNFVKTNILPGAVAEVGLLCCACVHSNPEEAVSQLVEPILLSVISSLKGTPRTGFGGGGTFEASASSKAPFLVRSTISPALEAAIDYQLKILSVCITYGGPALLRYKAQFKEAVFFAFDSPSWKVNGAADHLLRSLLGSQIHYYPIDQYNHPDAVALEEWISTKGFSTEESFIPKWHIPCDEEIHFANELIDIHFQSALDDLLKICQSKIHADQGDEKEHLKVTLLRIESTLQGLFSCLPDFVPNSRNGTSEDSSNLFLIAGATGCTVGSTALREKAAEIIHIACKYVLEKKSDDSILLILIIRIIDALGNYGTNFCGGIRSLEFDEWSSHRQAWKLESAAIIEPPINFIVSSHSKGKKRPRWALIDKAFMHSTWRSSQASYHLYRTSGNFCPSDHVTILMDDLLTLSLHSYETVRLLDLDAEEYAVLGSCSVLASQTVLKHLTTDPKSFSSFILAILSSSHHESLKAQKAINELFVKYNIQFSGVSRSFFRISDKENQTGGLGFSDLVSQIGSMSFDSTGLHWR 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g02303 1196 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 339 1087 IPR035309 GO:0016504|GO:0070577|GO:0070628
Vimu2g02303 1196 Pfam Proteasome-substrate-size regulator, mid region 445 587 IPR032430 -
Vimu2g02303 1196 Pfam Proteasome-substrate-size regulator, mid region 601 906 IPR032430 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g02303 Vimu-Chr2 18376255 18385262 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g02303 K06699 - gmx:100781622 1373.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02303 2 18376255 18385262 Vimu2g02303 2 18376255 18385262 ECH