Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01948 ATGGGTGCATGTTTGAGTAAGAAAAAAGGGTCTTCTACTTCTACCTCTTCTCCTCTTGCTGCAGCCAAGTTAGCTTCCGCAGTTTCTGAGCTGACGAATCCTTCTTCCTTTGTTGGTGTCAATGTTTCCAAACCCAAACTGGAAACTGACCCAGAAGTGAAATTGAAGAAGGAGAATCCTAAGAAAGTGGAAGAGAAACATGAGGCAGTGGCAGAAGTAGAGGGGCATGTGAAAAAGGAGATATTCATCATCAAGCACAGGAAGAGCCATGATGATAGGGAGAGAAATTCCAAGTCGCCACCTTGCACAACTCAGCAGAATGTCACCACTGAATCAATGGGTGATATAACCGCACAACCAGCAGCAACAAACATTGGTGTTGTAGGTGTGAGGACTTCAAGCTGCACCAAAGAGGAGGTGGATGCAATTCTCATACAGTGTGGGAGACTCAGCAGAAGCTCCTCAGGTAATGCTGTTGCTGCTTCTGGTGAACACAGAAGAAGGTACTCGGGTTCAAAGAGAAGTTACGATTTTGACCATTGTGACAATGACACCATTTCCAATGATGAGGACTCAAAGAAGGCCAATGCCAATGAAAGCAACAGTGATTTGTGTGAGGATGAGAGGCACCAACACCGGCTGCGGCACCGCCAGTCACCTAGTCCAAGGCCTTCTTCTCAGGAAAGGAGAAGAAGAACACCAAGCAGGGAAAGAGAGCAGCAACAACGTTCAAGCAGCCGAGAGAGGAGAGTTAGTAGATCTCCTGGAAGAAGGTCATCAGAGAACACACCGGCCACCGCAAGAAACAATAGCAACACTAGTTCTAGGCCTGGGAAAATGGTTTCAGTGCCTGCTACTGTTTCATCACTAGTGATGGATAAGAGTAACAACAATGGTGGTGGTGGAGAATCTGCAGCAACCACTGGCATCAAGAGGATAACAGTGAAGAGAAATGTTGGTGTTGCCTCACCGCGTTCTCAGTCTCCTGCAAGAGCAAATGGGAATGCAGCAAATGCTAATAAAGCATTCAACGAGAATCAGCAGCCACCATCCCTTAGTCGCAGCTCTTCAAGGAAAGCAGAACAATCACCCTACAAAAGAAATCCATTGAGTGAGATTGAACCTAACTCCCTTGCTTTTCCACATTCAGCAGCCAACAATAACAGCAGCAGGGTTCAAAACAAACCCAAAAAGGAATTTGAAACAGAGGCTATTCAGAGAACAAATAGCAGCAGAACTGCATTGGACAAAGGTATGACTGTAAATTGCAAGACAAAGATGCAACAAGATGGAGATATTAAAGTGCAATCTTCAATTACTGATAACGTTGTGGTGAAAACGATGGTACCACCAGGATTGGACAACCCAAAACCCCATACATTAACAAGAAGCAGATCTTCAAGGCGATCCCGGGACTTAGACCTCAACCCTGAAGCTCTATTGAATCCTCCGCAGTCCTACGCTTCACTGCTGCTTGAAGATATCCAGAACTTCCATCAGAAGAGCACTCAGCCTGTTTCTCTTCCAGCTTGTGTCACCAAAGCTTGCTCTATCCTTGAAGCTGTTGCTGATCTCAACTCTAACACCAGCTTGAATCTCTATGGTGCAGAGGACAGGAGAAGTCCACCAGCTTTTCAGTGTAGTAGGAATGACTACAATGTCCCATTGAGTGATAATGATTATGGGAAGAGGGAGCCAGATGCTGACGACCCAGTTGTGGAATCTATGTTAGTATTCAACGATGATGATGGGATGGAATCAAGCTTGCATAAGTATGTGACAGTGAATAGGGGTGGTTCACTCGGTGGGGTGGACATGGAGGACCAAGAGTCTTCAGGAAGCAACAGCTTCACTGTCGGTAATGGTCAACAGCACTGGGGAGTTTCTTCTTCATGGGAGCCCAGCTCTGTTGAATCAAGAGCTGAAACAGGATGTGATGTGGATGGAGGCAGGAAGAAGTTCAACAGCAACGAGAGGGACTGTGATCATCAGCATGGGAGTGGGATAGGACGTGGCAGGCTTGGTGCCAATAAAGTACATCACACCGTACCTATCGTCACAGCACCTGCACCCACATAG 2079 0.4651 MGACLSKKKGSSTSTSSPLAAAKLASAVSELTNPSSFVGVNVSKPKLETDPEVKLKKENPKKVEEKHEAVAEVEGHVKKEIFIIKHRKSHDDRERNSKSPPCTTQQNVTTESMGDITAQPAATNIGVVGVRTSSCTKEEVDAILIQCGRLSRSSSGNAVAASGEHRRRYSGSKRSYDFDHCDNDTISNDEDSKKANANESNSDLCEDERHQHRLRHRQSPSPRPSSQERRRRTPSREREQQQRSSSRERRVSRSPGRRSSENTPATARNNSNTSSRPGKMVSVPATVSSLVMDKSNNNGGGGESAATTGIKRITVKRNVGVASPRSQSPARANGNAANANKAFNENQQPPSLSRSSSRKAEQSPYKRNPLSEIEPNSLAFPHSAANNNSSRVQNKPKKEFETEAIQRTNSSRTALDKGMTVNCKTKMQQDGDIKVQSSITDNVVVKTMVPPGLDNPKPHTLTRSRSSRRSRDLDLNPEALLNPPQSYASLLLEDIQNFHQKSTQPVSLPACVTKACSILEAVADLNSNTSLNLYGAEDRRSPPAFQCSRNDYNVPLSDNDYGKREPDADDPVVESMLVFNDDDGMESSLHKYVTVNRGGSLGGVDMEDQESSGSNSFTVGNGQQHWGVSSSWEPSSVESRAETGCDVDGGRKKFNSNERDCDHQHGSGIGRGRLGANKVHHTVPIVTAPAPT 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01948 692 PANTHER OS02G0734667 PROTEIN 1 688 IPR040412 -
Vimu2g01948 692 MobiDBLite consensus disorder prediction 320 364 - -
Vimu2g01948 692 MobiDBLite consensus disorder prediction 166 214 - -
Vimu2g01948 692 MobiDBLite consensus disorder prediction 151 404 - -
Vimu2g01948 692 MobiDBLite consensus disorder prediction 607 638 - -
Vimu2g01948 692 MobiDBLite consensus disorder prediction 222 256 - -
Vimu2g01948 692 MobiDBLite consensus disorder prediction 86 117 - -
Vimu2g01948 692 MobiDBLite consensus disorder prediction 257 304 - -
Vimu2g01948 692 MobiDBLite consensus disorder prediction 448 479 - -
Vimu2g01948 692 MobiDBLite consensus disorder prediction 99 117 - -
Vimu2g01948 692 MobiDBLite consensus disorder prediction 644 667 - -
Vimu2g01948 692 MobiDBLite consensus disorder prediction 607 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01948 Vimu-Chr2 14164811 14169065 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01948 - - gmx:102667523 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01948 2 14164811 14169065 Vimu2g01948 2 14164811 14169065 ECH
Vimu2g01948 2 14164811 14169065 Vimu1g01207 1 9440980 9443696 PCT