Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01947 ATGGCGTCGTGGTGGTGCTCCTCTCCCTCCGCCACCCTCTCTGTACCCACCACCGCTCGCCGTCACTCCATCACTTCCCAGTTTCGCATCCAAACCCTCACATTCCCCCCTTCTTCCTGTCGTCGTTCCACCGCCGCTCCACCTTCTCTCCGATTTAGGGTTCCATGCTCCAACAGAACCGCCTTGCCGGATTCTCCGGCGCCGCCTCCGGACGAGGTGGATTGCGTGGGAACTGGACAAGACGTGGAGTGCCTCGTGAACACGGAGAAGACAGAATTGGAAACAATTTCGTCTTCATCGTCGATGCCCTGTCTCGCAGAAGCGCTGTGGGAATGGACGGTGTTGGTTTCACCATTCTTCTTCTGGGGCACGGCCATGGTGGCCATGAAAGAGGTGCTTCCCAAATATGGACCGTTCTTCGTCTCCGCTTTTCGCCTCATTCCGGCGGGGTTTCTTCTCGTGGGTTTCGCGGCTTCGAGAGGAAAGTCTCTTCCTTCTAGCTTCAATGCTTGGCTTTCCATCACACTTTTCGCCCTCGTTGATGCCACTTGCTTTCAGGGTTTTCTCGCAGAAGGGTTGCAGAGGACTTCAGCTGGTTTAGGAAGCGTTATAATTGATTCACAGCCTTTGACAGTTGCTGTACTTGCGGCTTTATTATTTGGGGAGTCAATTGGAGTTGTAGGAGCTGCTGGGCTTGTACTTGGTGTCGTTGGACTCGTACTACTCGAGCTACCCGCCCTATCATTTGATGAAAACAACTTCTCATTGTGGGGAAGTGGTGAGTGGTGGATGCTTCTTGCAGCTCAGAGTATGGCAGTTGGCACAGTCATGGTCCGGTGGGTCTCCAAGTACTCTGATTCTGTCATGGCAACTGGATGGCATATGATTATTGGTGGTCTCCCACTTCTGCTATTCTCAGTTCTTAACGCTGACCCTGCGGTGAGTGGGAGTCTCAAAGAGTATAGTTCAACTGACATATTGGCACTCCTCTATACATCTGTTTTTGGAAGTGCTGTGAGCTATGGCGTCTTCTTTTACAGTGCAACTAAAGGCAGCTTGACCAAGCTCAGTTCACTCACGTTTTTAACTCCAATGTTTGCTTCAATTTTTGGGTTTCTCTATCTTGGCGAGACCTTCTCTCCTGTACAACTAATTGGCGCCTTGGTCACTGTGGCTGGAATATACATGGTTAACTTCAGAAACACTGCTGAATGA 1215 0.5095 MASWWCSSPSATLSVPTTARRHSITSQFRIQTLTFPPSSCRRSTAAPPSLRFRVPCSNRTALPDSPAPPPDEVDCVGTGQDVECLVNTEKTELETISSSSSMPCLAEALWEWTVLVSPFFFWGTAMVAMKEVLPKYGPFFVSAFRLIPAGFLLVGFAASRGKSLPSSFNAWLSITLFALVDATCFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIGVVGAAGLVLGVVGLVLLELPALSFDENNFSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDSVMATGWHMIIGGLPLLLFSVLNADPAVSGSLKEYSSTDILALLYTSVFGSAVSYGVFFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPVQLIGALVTVAGIYMVNFRNTAE 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01947 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 293 401 - -
Vimu2g01947 404 PANTHER INNER MEMBRANE TRANSPORTER 99 403 - -
Vimu2g01947 404 Pfam EamA-like transporter family 112 242 IPR000620 GO:0016020
Vimu2g01947 404 Pfam EamA-like transporter family 259 399 IPR000620 GO:0016020
Vimu2g01947 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 245 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01947 - - var:108341119 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01947 2 14158961 14162225 Vimu2g01947 2 14158961 14162225 ECH