Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01620 ATGGCCACTCTTGTCTCTTCTTCTTCTCTTACTCTTCTTCCTTTCTTCTTCCTCCTCCTTCTTCTACTAACGTTTCAGGTTCAATCCACCAACCTTAACTACACAACTGACAGGAAATTCAGCACTTTGAGACTCCAAAGGATTCAGAGACACTTGGACAACATTAACAAGACCCCTCTCCTCACCATACAGAGTCCAGATGGTGATCTCATAGACTGTGTCCACAAAAGAAAGCAACCAGCTTTAGATCACCCCCTTTTGAAGAATCACAAGATCCAGAGAGTGCCTAGTGAGATGCCAAAGGGTATGAAGCTGAAGGAAAAGAGTGAAATGGGAATGGGAATGCAAAACTGGCACCAAAATGGGACGCTGTGTCCAAAAGGAACCGTTCCGATACGGCGGAGCACGGTGCATGACGTGTTGAGAGCAAAGTCTTTGTTTGACTTTGGAAAGAAACGACGACGTTTCTCTCTCGCACGCAGCGACGCCCCCGATGTTGTCTCCGGTAACGGCCACGAGCATGCAATCGCATACACAGGATCAGCGGAGGAGGTGTATGGGGCAAAGGCAACAATAAATGTGTGGGAACCTTCTATCCAAGAGGTGAACGAATTTAGTCTGTCTCAGATTTGGATTCTTTCTGGTTCCTTCGATGGCTCAGATCTCAACAGCATTGAAGCTGGATGGCAGAGTGACTCATATCAGGCAACAGGATGCTATAACCTTCTCTGTGCTGGTTTTGTGCAAGCAAACAGAAGAATAGCCATTGGAGCTGCCATTTCTCCCATTTCATCATACGATTCTAACCAATACGACATCACCATACTGGTTTGGAAGGACCCGAAAATAGGAAACTGGTGGATGAGTTTCGGCGATGGCACACTAGTGGGGTATTGGCCAGTGGAGTTATTCACACACTTGGCCACACATGCGACGATGGTGGAGTGGGGTGGCGAAGTGGTGAACACACGTGCGAACGGGCAACACACCTCCACCCAAATGGGATCTGGACACTTTGCAGGAGATGGTTTTGGAAAAGCAAGCTATTTTCGTAACCTTGAGATTGTAGACACCGACAATAGTCTTAGCTCGGTGCACAACATCTTAACCCTAGCTGAGAACACCAACTGCTATGACATCAAAAGCTCCTATAGTAACGAATGGGGCACCTACTTCTACTATGGTGGCCCAGGTAACAGTCATCAGTGCCCTTGA 1215 0.4749 MATLVSSSSLTLLPFFFLLLLLLTFQVQSTNLNYTTDRKFSTLRLQRIQRHLDNINKTPLLTIQSPDGDLIDCVHKRKQPALDHPLLKNHKIQRVPSEMPKGMKLKEKSEMGMGMQNWHQNGTLCPKGTVPIRRSTVHDVLRAKSLFDFGKKRRRFSLARSDAPDVVSGNGHEHAIAYTGSAEEVYGAKATINVWEPSIQEVNEFSLSQIWILSGSFDGSDLNSIEAGWQSDSYQATGCYNLLCAGFVQANRRIAIGAAISPISSYDSNQYDITILVWKDPKIGNWWMSFGDGTLVGYWPVELFTHLATHATMVEWGGEVVNTRANGQHTSTQMGSGHFAGDGFGKASYFRNLEIVDTDNSLSSVHNILTLAENTNCYDIKSSYSNEWGTYFYYGGPGNSHQCP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01620 404 Pfam Neprosin 229 397 IPR004314 -
Vimu2g01620 404 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 48 399 - -
Vimu2g01620 404 Pfam Neprosin activation peptide 62 178 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01620 Vimu-Chr2 11481019 11484033 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01620 - - gmx:100789333 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01620 2 11481019 11484033 Vimu2g01620 2 11481019 11484033 ECH