Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01606 ATGACATGTATATGCAGGTATATTTTGTCATCAAAGATTGAGAATAAACCAGATGACTACGTATTTGTATACTACCGAGGCAGAAACGATGCATGGGATGGTTATGGAGGTGCTGTTGTGTACACAAGAAGTGCAGTTTTGCCAGAATCTATAGTTCCTGAACTTGAAAGAGCAGCCAAGAATGTAGGAAGAGACTTCAGCAAATTCATCAAGACAGATAACACATGTGGACCAGAGCCTTCCCTGGTGGAAAGGTTGGAGAAAAAGGTAGAGGAGGGAGAGGAGACCATTGTGAAGGAAGTTGAACAGTTAGAAGAAGAGGTGGAGAAAGTGGGGAAAACAGAGGTCACATTGTTTCAGAAATTGGCAGAAGGGTTCAAAGTATTTCAAGAAGATGAGGAAAACTTCTTGAAAGGGCTCTCAAAAGAAGAAATGGAGATACTTAATGGCCTCAAAATGGAAGCCAGAGAACGAGACTTTCGAGTGACTTCTGATGCGGTTGATGAGACATTTGTGTTCTTGCTTTTCTTTTCCGGTAGTATAGATAATGTGGTAGAGGCCTCAAACTTTCAGGGTATAGAAACAAGTAGAGTCGAAGTTAAGGGACAAGAAAGAATTAGTGTTGTCTGGACCGAAGGATAG 642 0.4143 MTCICRYILSSKIENKPDDYVFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKNVGRDFSKFIKTDNTCGPEPSLVERLEKKVEEGEETIVKEVEQLEEEVEKVGKTEVTLFQKLAEGFKVFQEDEENFLKGLSKEEMEILNGLKMEARERDFRVTSDAVDETFVFLLFFSGSIDNVVEASNFQGIETSRVEVKGQERISVVWTEG 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01606 213 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 7 157 IPR044682 GO:0010028|GO:0046422
Vimu2g01606 213 Coils Coil 83 114 - -
Vimu2g01606 213 Pfam VDE lipocalin domain 7 74 IPR010788 GO:0046422
Vimu2g01606 213 SUPERFAMILY Lipocalins 14 80 IPR012674 -
Vimu2g01606 213 Gene3D - 6 87 IPR012674 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01606 K09839 - gmx:100816085 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01606 2 11279993 11281530 Vimu2g01606 2 11279993 11281530 ECH