Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01598 ATGACATTGCTCTTTCCTTCTTTTGGTGGATATATGGCTAATCATTCTTTAGTTTTAGACAACTCATCTGTTAGTACTGTTACTGTAGCAGAGCAGCCATTAGTCATTGGGCAAGAGTTTCCAGATGTGGAAACCTGCCGAAGAACACTGAAAGATATTGCCATTGCTATGCATTTTGATCTTCGGATAGTTAAGTCTGATCGCAGTCGTTTTATAGCAAAATGCTCCAAAGAAGGGTGCCCATGGCGGGTCCACGTTGCAAAGTGTCCTGGTGTTCCAACTTTTACTGTAAGAACACTACAAGGAGACCATACTTGTGAGGGGGTTCAGAACCTTCATCATCAGCAGGCATCAGTAGGTTGGGTTGCAAGATCTGTTGAAGCACGCATTCGAGATAATCCACAATACAAACCCAGGGAAATACTGCAAGATATTCGTGATCAGCATGGAGTTGCTGTTTCTTACATGCAAGCTTGGCGGGGGAAGGAACGTAGCATGGCTGCCCTTCATGGGACATTTGAAGAGGGTTACCGTCTTCTCCCTGCTTACTGCGAACAAATAAGGAAAACCAACCCTGGTAGCATTGCATCTGTTGTTGCTACTGGACAAGAAAATTGTTTTCAAAGACTGTTTATTTCTTATCGTGCATCAATTTATGGGTTTATAAATGCTTGTAGGCCACTTGTAGAACTTGACCGAGCACATCTTAAAGGAAAGTACCTAGGTACACTGCTTTGTGCTGCAGCTGTTGATGCAGATGATGCGCTGTTTCCTTTGGCTATTGCTGTTGTTGATACTGAAAGTGATGATAATTGGATGTGGTTCATGTCAGAGTTGCGCAAACTTCTAGGAGTGAACACAGAAAACATGCCTAGGCTGACAATACTATCTGAAAGGCAAAGAGGCTTGGTGGAGGCAGTAGAAACACATTTTCCTAGTGCTTCACACGGTTTCTGTCTGCGTTTTGTGAGTGAAAATTTTCGTGATACATTTAAAAACACAAAGTTGGTAAACATCTTTTGGAATGCAGTCTATGCGCTTACTGCTGCTGAATTTGAGAGCAAGATTACTGAGATGATTGAAATTTCACAAGATGTTTTACCATGGTTTCAACAATTTCCTCCCTATCTTTGGGCTGTGGCATACTTTGATGGTGTTCGATATGGCCATTTCACACTTGGAGTAACAGAATTATTGTATAACTGGGCCCTTGAATGTCATGAGCTCCCTATAGTTCAGATGATGGAACACATCCGTCAGCAGATGATATCATGGTTTAGTGATCGGCAGGATATGGGCATGAGGTGGACATCAATTCTTGTACCGTCAGCGGAGAAGCGAATTTTGGAGGCAATTGCCGATGCTCATTGCTATCAAGTTCTCCGGGCAAATGAAGTTGAGTTTGAAATTGTGTCCACTGAAAGGACCAATATTGTAGATATACGGAGTCGTGAATGCTCTTGTCGCCGTTGGCAGCTGTATGGATTACCTTGTGCCCATGCTGCTGCTGCACTTATCTCTTGTGGACACAATGCCCATATGTTTGCTGAACCATGCTTCACTGTACAAAGTTATAGAATGACCTATTCTCAGATGATTAATCCTATACCAGATAAGAGCCAATGGAGAGATCAGGGAGAAGGAGCCGAAGGTGGAGGGGGGGCAAGGGTTGATATTATAATCCACCCACCAAAGACTCGCCGGCCACCTGGGAGGCCTAAAAAGAAGGTTCTACGAGTGGAGAATTTTAAGCGACCCAAAAGAGTTGTCCAATGTGGCCGCTGTCACATGTTAGGACATTCTCAAAAGAAATGCACAATGCCCATTTGA 1830 0.435 MTLLFPSFGGYMANHSLVLDNSSVSTVTVAEQPLVIGQEFPDVETCRRTLKDIAIAMHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPGVPTFTVRTLQGDHTCEGVQNLHHQQASVGWVARSVEARIRDNPQYKPREILQDIRDQHGVAVSYMQAWRGKERSMAALHGTFEEGYRLLPAYCEQIRKTNPGSIASVVATGQENCFQRLFISYRASIYGFINACRPLVELDRAHLKGKYLGTLLCAAAVDADDALFPLAIAVVDTESDDNWMWFMSELRKLLGVNTENMPRLTILSERQRGLVEAVETHFPSASHGFCLRFVSENFRDTFKNTKLVNIFWNAVYALTAAEFESKITEMIEISQDVLPWFQQFPPYLWAVAYFDGVRYGHFTLGVTELLYNWALECHELPIVQMMEHIRQQMISWFSDRQDMGMRWTSILVPSAEKRILEAIADAHCYQVLRANEVEFEIVSTERTNIVDIRSRECSCRRWQLYGLPCAHAAAALISCGHNAHMFAEPCFTVQSYRMTYSQMINPIPDKSQWRDQGEGAEGGGGARVDIIIHPPKTRRPPGRPKKKVLRVENFKRPKRVVQCGRCHMLGHSQKKCTMPI 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01598 609 PANTHER POLYPROTEIN, PUTATIVE-RELATED 32 577 - -
Vimu2g01598 609 MobiDBLite consensus disorder prediction 538 557 - -
Vimu2g01598 609 ProSiteProfiles Zinc finger SWIM-type profile. 468 509 IPR007527 GO:0008270
Vimu2g01598 609 Pfam SWIM zinc finger 475 508 IPR007527 GO:0008270
Vimu2g01598 609 SMART 26again6 484 511 IPR006564 GO:0008270
Vimu2g01598 609 Pfam MuDR family transposase 34 97 IPR004332 -
Vimu2g01598 609 Pfam MULE transposase domain 229 325 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01598 Vimu-Chr2 11237377 11242403 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01598 - - gmx:100808214 1183.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01598 2 11237377 11242403 Vimu2g01598 2 11237377 11242403 ECH