Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01590 ATGGAAAGAAGAGAAAAAGGTGAGAAAAGGGAAGTGTTAATGGCCGAAAAGTTGAAAGGTGGGGTTTTTGTGGGGAAAAGAGGAGGTCCTTCAACTCCCCCACCCAAATGGAGACTTGAGTTTCCCTCTCAGCAGAATGACAATAATGGTAACAACAGAAGCAAAACCAAAAACCAAGTTGAAGAGTTCCTCAACTTTCCCACCCCAACAACACTCTCTGCCAGAAAACTCTGCGCCAAACTCTGGCAAATTCAGCCCCACAAACAGGCCCCACTTCCCAAAATGAACAGGCCTGCATTCATCCGCCCTCACCGTAGGGACACACTTCTCAAGGTTCCAAATCTTAAACCTTTGTCCCAGCCTCCTCATACTCACCAGCCAGCATCCGCTACGCGCCTGACAGAAAATGTAGGAACATCACTTGTTCAGCACCGTAGATCAACTAAAAGGAATGGTCGCACTAAACAGCCTGTATCTCCTCCTTGTCACTGTAGCTCAATGCAAGTTGCACCATATAATAACCCTATGAGATCCGTAGACTTCAGGAGTTGGATTACAGAGTCAAGTGGCAACCCCAAAACATCCAGAGAGTTACTCAAGGTACTCAACCATATATGGTGTCTTGAAGAACAGCATGCATCAAACCTATCAGTAGTGAAGGCCCTGAAGATGGAACTAGATCTTTCTCGGGCACAGGTCAAAGAGTTACAACAAAAAAAGCAATTGAATAAGCATGAAATGGAGAACTTAATAAAGAAAAGAACTGAGGAGAAGATTGTTTACAAGAGCAAAGAGCATGATAAAATTAAAGCTGCAATTCAATCTGTGATGAAAGAGATAGAAGATGAAAGGAGGTTAAGAAAGCATTCAGAAAGCTTGCATCGGAGGTTGGCTAGGGAGCTTTCAGAAGTGAGGTCTTCATTCAGTGGTTCTATAAAAGATCTTGAAAAAGAGAGAAAAACACGGATCCTTTTGGAGAATTTGTGTGATGATTTTGCCAAAGGAATAAGAGATTATGAATATGAGGTACGTTCACTTGTGCATGATAATTCTGAGCAGGGTCAAGCTCAGGTTAAAGGGGGTAGCCTTGATAGGCTAATACTGCATCTGTCAGATGCTTGGCTTGATGAGCGCAAGCAAATGAAGTTAGTTCAAGCTGGCCGTGATCTCCCTGAGATAGATTCATCAATCGTTGACAAGTTAGGTGTTGATATTGAAACATTTCTGCATGCAAAAAGGTCTGTTAACTTGAGAAGATACAGTAACTCCTCCACAAAGGAGGCAAAGGAAATTTACCCTTGCCTGCATTCAAGGGCACCTCGTAATGTAACTGAAGAAGACTCCGTTGGTACATTCATTTTAGAGCAGAAAAAGACTTCAGACAAAGGACTCGACAAACATGGCTCCAAAATGAACAACAACAATACTGCAGAGGTTGATAGAGAAAAGAAAGGAAGGCACAATTCTATGAGGAAACATGTTGAGTCCAAGGAAATCATTGAAGACTGTCGTGAGTTGCAAGCAGGTATGATGAAGAACCTGTCGTGTGATGAAAATGAGAGTTGGTTTATTGAGAGGAAATCAAGTGAAATTGGAGGGGACAGCACAGCTCTATTTAATACCCCTGGGACATCTACTGTTTGTGAGGCAACACAAGGTGCACCAGAAAGTAATGCATTATTGTGGACAAAGAGAATGAATTCAAATCATGCAGTTAGAAACAGTTCCTTGTCTTCTGAAGGCAATGATAAGGTTTATCCAGAGACTATTTTCAGGGAAGATTTACCTCTCCGAACCGCAGTTAGTCCTGTAAAACAGTGGAAGTCTACATTGATTGTCCCAGATTTTGACAAGTCTGAGTCTTGTTCCAAATTGCATATAAAAGACAATGACACGTTGATGGAAAAACTGCTTGAAGCAAGGATGGAGAAGCAGAAATCCCGCTCTAGAGCAAGCATTAGCAAAAGCTCATTTCCTTCTGTCAGACAAGTTTGTAATGAGAAACATAGGAGTGTGAGTAGTTGCCACGGTATCGCACTCTGA 2043 0.4219 MERREKGEKREVLMAEKLKGGVFVGKRGGPSTPPPKWRLEFPSQQNDNNGNNRSKTKNQVEEFLNFPTPTTLSARKLCAKLWQIQPHKQAPLPKMNRPAFIRPHRRDTLLKVPNLKPLSQPPHTHQPASATRLTENVGTSLVQHRRSTKRNGRTKQPVSPPCHCSSMQVAPYNNPMRSVDFRSWITESSGNPKTSRELLKVLNHIWCLEEQHASNLSVVKALKMELDLSRAQVKELQQKKQLNKHEMENLIKKRTEEKIVYKSKEHDKIKAAIQSVMKEIEDERRLRKHSESLHRRLARELSEVRSSFSGSIKDLEKERKTRILLENLCDDFAKGIRDYEYEVRSLVHDNSEQGQAQVKGGSLDRLILHLSDAWLDERKQMKLVQAGRDLPEIDSSIVDKLGVDIETFLHAKRSVNLRRYSNSSTKEAKEIYPCLHSRAPRNVTEEDSVGTFILEQKKTSDKGLDKHGSKMNNNNTAEVDREKKGRHNSMRKHVESKEIIEDCRELQAGMMKNLSCDENESWFIERKSSEIGGDSTALFNTPGTSTVCEATQGAPESNALLWTKRMNSNHAVRNSSLSSEGNDKVYPETIFREDLPLRTAVSPVKQWKSTLIVPDFDKSESCSKLHIKDNDTLMEKLLEARMEKQKSRSRASISKSSFPSVRQVCNEKHRSVSSCHGIAL 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01590 680 Coils Coil 219 253 - -
Vimu2g01590 680 MobiDBLite consensus disorder prediction 476 493 - -
Vimu2g01590 680 MobiDBLite consensus disorder prediction 460 493 - -
Vimu2g01590 680 MobiDBLite consensus disorder prediction 38 55 - -
Vimu2g01590 680 PANTHER GB|AAF24581.1 5 651 IPR043424 -
Vimu2g01590 680 MobiDBLite consensus disorder prediction 21 55 - -
Vimu2g01590 680 MobiDBLite consensus disorder prediction 137 169 - -
Vimu2g01590 680 MobiDBLite consensus disorder prediction 153 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01590 Vimu-Chr2 11192438 11198003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01590 - - pvu:PHAVU_006G109400g 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01590 2 11192438 11198003 Vimu9g00190 9 2376367 2379752 PCT