Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01493 ATGGCAAGTGTTAGGAGAGTGGGCGTGGCGGTTGATTTCTCATCGTGCAGCATCAAAGCACTGCAATGGACGGTGGATAACGTGGTAAAAGAAGGCGATCATCTCGTTCTTATCGTGGTTCGCCACGATTCCAATTACGAGCACGGCGAGATGCAGCTCTGGAAAACCACTGGTTCACCTCTAATACCTCTGTCAGAGTTCTCTGAACCTGCGGTCATGAAGAATTATAAATTCAATCCCAAACCCGAAGTAATTGATATAGTCCAAACTGCAGCCAGGCAAAATAATATTACGGTAATAATGAAGATCTATTGGGGAGATGCTCGTGAGAAGTTATGTGAAGCGGTTGATCAAGTACCTCTAGACTACCTTACCCTGGGAAACAGAGGCCTTGGACCTCTCCAAAGGGTCATAATGGGCAGCGTCAGCAACTATGTGGTGAAGCATGCCACCTGTCCTGTCACTGTGGTGAAGAGTTAA 480 0.4688 MASVRRVGVAVDFSSCSIKALQWTVDNVVKEGDHLVLIVVRHDSNYEHGEMQLWKTTGSPLIPLSEFSEPAVMKNYKFNPKPEVIDIVQTAARQNNITVIMKIYWGDAREKLCEAVDQVPLDYLTLGNRGLGPLQRVIMGSVSNYVVKHATCPVTVVKS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01493 159 PRINTS Universal stress protein signature 136 158 IPR006015 -
Vimu2g01493 159 PRINTS Universal stress protein signature 4 22 IPR006015 -
Vimu2g01493 159 PRINTS Universal stress protein signature 118 130 IPR006015 -
Vimu2g01493 159 PANTHER IMP2'P 2 158 - -
Vimu2g01493 159 CDD USP_Like 6 157 - -
Vimu2g01493 159 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Vimu2g01493 159 Gene3D HUPs 2 159 IPR014729 -
Vimu2g01493 159 FunFam Universal stress protein family protein 2 159 - -
Vimu2g01493 159 Pfam Universal stress protein family 5 158 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01493 Vimu-Chr2 10263465 10265190 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01493 - - gmx:100816534 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01493 2 10263465 10265190 Vimu2g01493 2 10263465 10265190 ECH