Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01487 ATGACCATCACAAACTCTTGTCCTCTGGTAATCTTCCTGTGCTTCACAATGCCTCATTTTCTATTTTGTGACGAGGAAGTGCATTCAGGTCAATCGACCCAGATTTTGCATTCTTTCCATGAAGACAGAAACGGGTCTATAACAGTGTCGGTGAAAGCAGAACATGCTGCCTCTACAAAACATTTGTTGCATGGTTCTTGCACAAGCAAAGACATAAGCATCTCACAAAGCACAAGTTCTACATCAGGGATACCACAGTTCATTCTGCAGATTGTTAACACGTGTGTTTCTGGATGTCCTCTCCGTGACATTCACCTCCACTGTGGTTGGTTTGCTTCTGATAGACTAGTGAACCCCAGATTGTTTAAAAGGATCTCCTACGATGATTGTTTGGTCAATGGAGGGAACCCTTTAACCCCTGGCCAGATAATCAGAATCGCTTATTCCAATTCTTTCATGTACCCTATTGCTTTCAAGTCTGCAAGATTTTGCTGA 495 0.4263 MTITNSCPLVIFLCFTMPHFLFCDEEVHSGQSTQILHSFHEDRNGSITVSVKAEHAASTKHLLHGSCTSKDISISQSTSSTSGIPQFILQIVNTCVSGCPLRDIHLHCGWFASDRLVNPRLFKRISYDDCLVNGGNPLTPGQIIRIAYSNSFMYPIAFKSARFC 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01487 164 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 32 162 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01487 Vimu-Chr2 10226462 10227152 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01487 - - var:108341572 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01487 2 10226462 10227152 Vimu2g01487 2 10226462 10227152 ECH