Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01454 ATGGCTCGGAAGGGTAATCAGCAGAAGAATGGAGTGGACCGTCAGGGATTGAATCACAAAAAAGGGGTTTCTGATAGTGTGCTTCCGGGAATGAAGGGCCATGTTAAAGGAGGGCCGGTGAAGGTTTTCCCGAGAGAGGACCTCACTGACGGTGATAGCGGTGCTGCGCGGACTGCATGTGATGCCAGTTCTTCAGGTGATGACTTTAACAATGAACAAAAGTCTGAAAATGTTTCTCGGAAAGAGAAACAAGGGATGGCTGGAAAGCATGACCTGGAGGAGTCCTTGCCCTTTGAGAGAGACTCGAGGGATGACATTTTGAATTCCGAAGGTTCAGTACAAGAAGAAGAAAATGGGACTTTGCCTAGAAGTGATCAGGGTCTTCAGAGTATAAATAGTAGATTGAGCTGTATACTGGATAGTTTGCACCTGAAAAGTGTGGTGGATAAAATAGACCTTGCCGATAATGTCATAATTAGAAGATTAAGGTTTTCACTGTTTTCCATGTTCACAGCAATTTCAGAGTGGCTAACCAGGCAGACTCCATTGTTTGTATCTCTTAGAACCATCATGTTTAAAGCCTATCATGATTTCAGAACGAGAGTTGTGCAGGCATATCCTGTTATTCTAAAGTGGCTCATGCATTTTGGAAATGTAGTGCTCCTATTATCACTGTTTTGGTTGGATTGTGCACTTCGGGGTATTGATTCATTTGTACGAATGGGTACAACGTCCTTCTTCTCTGTTATATGGTGTAGCATATTTTCTGTGATTAGTATGATAGGGGTGCTCAAGTTTCTTGCTGTTCTGGGCCTGGCTGCTTTGATTGGATTTTTTCTTGGGCTTATGCTTGCAATTTTGATTGTTGCAATCATTGGAGTTGTTATCTTGTGGTTTTATGGTAGCTTTTGGACAACGACATTTTTCATCATCCTAGGAGGATTGGCATTTATGTTTAGTCATGAACGGGTGGCACTACTTATCACCACAGTGTATTCTGTCTATTGTGCATGGCTGTATGTTGGGTGGCTTGGTTTACTGGTGGCTTTTAATTTAGCTTTTATCTCTAGTGATGTTCTGATATACTTCCTCAAGAAAAACATAGATCAACAGAGTAGATCCAATCCTTTTGAGCAAAGAGCTGGAATGTATGGTCAACCTGGATTCAGTGACGGATCAACACATGCTTCTTCCTCTGAAAATGGACCGGGACCATCGGCAGATCGCAGTGCTGGGATCCCTTCAACTAGTGGGGTTGATTCTGATGTAACTTCTGAAGATGAAGTAGTCCGTTTGTTGAACTGCTCTGATCACTATGCAGCACTGGGCTTGACACGATATGAAAATATAGATGTTTCAATACTAAAGCGGGAATATAGGAAAAAGGCAATGTTGGTACATCCTGACAAAAATATGGGTAATGAAAAGGCTGCTGAAGCATTTAAGAAACTTCAAAATGCGTATGAGATTCTAATGGATTCCTTGAAGCGAAAAGCTTATGATGATGAGCTAAGGAGAGAGGAGCTATTGAGTGTATTTCGTAGATTTCATGACGCTTCTAATAAGAATGGTAGGCATGGATTCTTTCCTTCAGGATTTGCACGGTCTGATGTAGATAGCAAGGACCCATTTGGTGATTCAAGGCGAATAGCCTGCAAAAGGTGTGGTGGTTTTCATGTCTGGATACACACTAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGCCAAGATTTTCATCAAGCTAAGGATGGGGATGGATGGGTTGAACAATCTTCCCAACCATTTCTTTTTGGCTTATTGCAGAAGGTGGATGCTCCTTCAGCGTATGTGTGTGCTGGTAGCAGGATATACGATGCCACCGAATGGTATATCTGTCAGGGCATGAGATGTCCAGCGAACACTCATAAGCCAAGTTTCCATGTTAACACCAGTTTAATGTCCAAGAATAATTCTGGTAAAGGAACTAGTTCAGGTCAAAGAGGTGGGCGGATGCCAGCACCTAATATCGAAGAAACCATGACTGAGGAAGAATTCTTTGAATGGTTACAAAATGCAGTCCAGGCAGGTGCGTTTGACAATTTTAGTGGCACTGCAACAGAGAGCCCATCACCCAAATCTGGAAATGGGATGAAAAGTCCTAGTAGTAGTGGTGGTGGTGCTAATGCTAGTGCTAGTGGCAGTAGCAGCAAGAGAAAGAAAAAGGGAAAAAAGCAATGGTGA 2226 0.4268 MARKGNQQKNGVDRQGLNHKKGVSDSVLPGMKGHVKGGPVKVFPREDLTDGDSGAARTACDASSSGDDFNNEQKSENVSRKEKQGMAGKHDLEESLPFERDSRDDILNSEGSVQEEENGTLPRSDQGLQSINSRLSCILDSLHLKSVVDKIDLADNVIIRRLRFSLFSMFTAISEWLTRQTPLFVSLRTIMFKAYHDFRTRVVQAYPVILKWLMHFGNVVLLLSLFWLDCALRGIDSFVRMGTTSFFSVIWCSIFSVISMIGVLKFLAVLGLAALIGFFLGLMLAILIVAIIGVVILWFYGSFWTTTFFIILGGLAFMFSHERVALLITTVYSVYCAWLYVGWLGLLVAFNLAFISSDVLIYFLKKNIDQQSRSNPFEQRAGMYGQPGFSDGSTHASSSENGPGPSADRSAGIPSTSGVDSDVTSEDEVVRLLNCSDHYAALGLTRYENIDVSILKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREELLSVFRRFHDASNKNGRHGFFPSGFARSDVDSKDPFGDSRRIACKRCGGFHVWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCAGSRIYDATEWYICQGMRCPANTHKPSFHVNTSLMSKNNSGKGTSSGQRGGRMPAPNIEETMTEEEFFEWLQNAVQAGAFDNFSGTATESPSPKSGNGMKSPSSSGGGANASASGSSSKRKKKGKKQW 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01454 741 MobiDBLite consensus disorder prediction 1 101 - -
Vimu2g01454 741 Gene3D DnaJ domain 425 516 IPR036869 -
Vimu2g01454 741 ProSitePatterns Nt-dnaJ domain signature. 481 500 IPR018253 -
Vimu2g01454 741 SMART dnaj_3 436 496 IPR001623 -
Vimu2g01454 741 MobiDBLite consensus disorder prediction 643 664 - -
Vimu2g01454 741 MobiDBLite consensus disorder prediction 694 730 - -
Vimu2g01454 741 MobiDBLite consensus disorder prediction 643 669 - -
Vimu2g01454 741 MobiDBLite consensus disorder prediction 390 422 - -
Vimu2g01454 741 MobiDBLite consensus disorder prediction 58 72 - -
Vimu2g01454 741 MobiDBLite consensus disorder prediction 73 101 - -
Vimu2g01454 741 PRINTS DnaJ domain signature 476 496 IPR001623 -
Vimu2g01454 741 PRINTS DnaJ domain signature 459 474 IPR001623 -
Vimu2g01454 741 ProSiteProfiles dnaJ domain profile. 437 504 IPR001623 -
Vimu2g01454 741 Pfam Cleavage inducing molecular chaperone 547 644 IPR032843 -
Vimu2g01454 741 Pfam DnaJ domain 437 501 IPR001623 -
Vimu2g01454 741 CDD DnaJ 437 493 IPR001623 -
Vimu2g01454 741 PANTHER OS03G0832900 PROTEIN 1 741 - -
Vimu2g01454 741 MobiDBLite consensus disorder prediction 694 741 - -
Vimu2g01454 741 SUPERFAMILY Chaperone J-domain 432 521 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01454 Vimu-Chr2 9956656 9961270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01454 1 704 Miscellaneous Gene Families AT5G49580 52.595 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01454 K09534 - gmx:100789594 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01454 2 9956656 9961270 Vimu2g01454 2 9956656 9961270 ECH