Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01263 ATGTTGCTCCATCTTGAGTTTGACAGCTCAAAACAAAGTGCAATTACGCGAGCATCTGATGACTACTATCCAAAAAACACCACAACTCAGTCTCCACATATAGCTGCTGTAGCTTTCAACAGCATATTCCATGGTGAAATTGTTGTACCGGACTGGGACATGTTCTATAGTCTTCACGATGCAGCTGCTAGAGCAGTTGGAGGATGTGGAGTATATGTAAGAGACAAACCTGGCCAACATGATTTCAATGTATTGAAAAAGCTTGTACTTCCTGATGGATCAGTTCTCAGAGCCAGATATCCTGGGAGACCATCGCGTGATTGCTTATTTGTTGATCCAGTTATGGATAGGAAGAGCCTTCTCAAGATTTGGAACTTGAACAAATGTGGGGGAGTCATAGCCCTCTTTAATTGCCAAGGAGCAGGTTCCTGGCCTGGTCTTGAAAGTAAGACTGAGGAGGAAGACATTATTTTTGAGCAATCTGGCAAGGTATCTCCCTCAGACATTGAGTATTTTGAAGAGGTTTCAGGAGGTCCATGGACTCAAGATTGTGCAGTTTTTCGCTTCAACACAGGTTTGGATCATAATGAATGGTTAATGGACTACATGTTTCGGTTTGCAATTTCAGGATCTCTGACACGACTATCAAAGGAAGAATCATTTGATGTCACATTAAAAGTATTGCAGTGTGAAGTATTCACAGTATCCCCTATAAAGGTTTATAATCAAACAATCCAGTTTGCACCAATAGGACTAACAAACATGTACAACTCTGGTGGAGCTGTTGAAGCAGTTGAATTCAGTGATTCTTCTGAATCAAAAATACACATAAGGGGTAGAGGAGAAGGTGAATTTGGAGCTTACTCCAACTTAAGACCAAAGTCTTGCAGTGTAAATTCTGAAGATTTGGAGTTCAAATTTAGAGAGGAAGATAAACTTTTTGCAGTAACAATTCCAGCAAAAAACACTTCATGGGACATCACCATCTGCTACTGA 996 0.4056 MLLHLEFDSSKQSAITRASDDYYPKNTTTQSPHIAAVAFNSIFHGEIVVPDWDMFYSLHDAAARAVGGCGVYVRDKPGQHDFNVLKKLVLPDGSVLRARYPGRPSRDCLFVDPVMDRKSLLKIWNLNKCGGVIALFNCQGAGSWPGLESKTEEEDIIFEQSGKVSPSDIEYFEEVSGGPWTQDCAVFRFNTGLDHNEWLMDYMFRFAISGSLTRLSKEESFDVTLKVLQCEVFTVSPIKVYNQTIQFAPIGLTNMYNSGGAVEAVEFSDSSESKIHIRGRGEGEFGAYSNLRPKSCSVNSEDLEFKFREEDKLFAVTIPAKNTSWDITICY 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01263 331 PANTHER - 9 322 IPR008811 -
Vimu2g01263 331 Pfam Raffinose synthase or seed imbibition protein Sip1 7 315 IPR008811 -
Vimu2g01263 331 SUPERFAMILY (Trans)glycosidases 9 100 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01263 Vimu-Chr2 8453204 8454864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01263 9 329 Glycoside Hydrolase AT1G55740 45.238 2.63e-91 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01263 - - gmx:100819413 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01263 2 8453204 8454864 Vimu2g01263 2 8453204 8454864 ECH