Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01253 ATGGCGGATCTCAAGTCCACATTCTCGAACTTCTATTACGTTCTCAAAGACGAACTCCTTCACGACCCCGCTTTCGAATTCTCCGATGACGCTCGCCAATGGGTCGACCGGATGCTGGACTACAATGTGCCAGGAGGAAAGTTGAACCGGGGACTCTCAGTCATTGACAGCTACAGACTCTTGAAAGAAGGACAGGCATTAAATGATGACGAGATTTTCCTTGCTAGTGCTCTTGGTTGGTGTATTGAATGGCTTCAGGCGTATTTTCTTGTCCTTGATGACATTATGGATAATTCTCACACACGTAGGGGTCAGCCATGCTGGTTTAGAGTGCCCGAGGTTGAGTTCCAGACTGCTTCAGGACAGATGATAGATCTGATTACCACACTGCAAGGAGGAAAAGACCTGTCCAAATACACATTAACTCTGCATCGGCGTATTGTTCAATACAAGACTGCTTATTATTCGTTTTACCTCCCAGTTGCATGTGCATTGCTCATGGCGGGTGAGAATCTGGAAAACCATGTTGATGTGAAGAACATTCTTGTTGAGATGGGAACCTACTTTCAAGTACAGGATGATTATTTGGATTGCTTTGGGGATCCTGATACTATTGGAAAGATAGGTACAGATATTGAAGATTTTAAGTGCTCTTGGTTAGTTGCGAAAGCTTTGGAGCTTAGCAACGAGCAACAAAAGAAAGTTCTATACGACAACTATGGCAATGCAGATCCAGAAAATGTGGCTAAAGTAAAGGCCCTGTATAACGAGCTTAATCTTAAGAGTGCATTTGAGGAGTATGAGAGCAAGAGCTATGAGAAGCTTGTAACCTCCATTGAAGCTCATCCTAGCAAAGCAGTTCAAGCTGTATTGAAGTCCTTTTTGGCTAAGATTTACAAGAGGCAGAAATAG 912 0.4342 MADLKSTFSNFYYVLKDELLHDPAFEFSDDARQWVDRMLDYNVPGGKLNRGLSVIDSYRLLKEGQALNDDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPEVEFQTASGQMIDLITTLQGGKDLSKYTLTLHRRIVQYKTAYYSFYLPVACALLMAGENLENHVDVKNILVEMGTYFQVQDDYLDCFGDPDTIGKIGTDIEDFKCSWLVAKALELSNEQQKKVLYDNYGNADPENVAKVKALYNELNLKSAFEEYESKSYEKLVTSIEAHPSKAVQAVLKSFLAKIYKRQK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01253 303 CDD Trans_IPPS_HT 30 301 IPR000092 GO:0008299
Vimu2g01253 303 ProSitePatterns Polyprenyl synthases signature 2. 185 197 IPR033749 -
Vimu2g01253 303 Gene3D Farnesyl Diphosphate Synthase 117 302 IPR008949 -
Vimu2g01253 303 Pfam Polyprenyl synthetase 113 257 IPR000092 GO:0008299
Vimu2g01253 303 Pfam Polyprenyl synthetase 33 111 IPR000092 GO:0008299
Vimu2g01253 303 ProSitePatterns Polyprenyl synthases signature 1. 90 104 IPR033749 -
Vimu2g01253 303 Gene3D Farnesyl Diphosphate Synthase 4 116 IPR008949 -
Vimu2g01253 303 PANTHER FARNESYL-PYROPHOSPHATE SYNTHETASE 113 303 IPR039702 GO:0008299|GO:0016765
Vimu2g01253 303 SUPERFAMILY Terpenoid synthases 7 302 IPR008949 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01253 K00787 - gmx:100782137 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01253 2 8362644 8366748 Vimu2g01253 2 8362644 8366748 ECH