Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01246 ATGAGTTTCAGAGTTAGAGATCAAGAAAAGGAATCTGATTCTCCAAGAGAGGTTGGAGAGATTGACACAAGGGCTCCATTTCAATCTGTTAGAGCAGCAGTTAGTTTATTTGGTGAAGTAGCCGTGTCAAAGGACAAACGTTCTTTCAAGAGAAGATCGTCAGAGAATGTGCTGGAAAAGGAGACTCAGCTTCTCTTGGCCCAGAGAGAATTAACAACAATAAAGAAAAAGCTGGATAGTTCTGAGATCACAAAAGGAAAAGCACTTTCCGAGCTTGATAGGGCCAATTTAACACTTCAGGAATTGGAAAAGAAGCTCAACAGTGTCAGACAATCAAAGCAATCAGCCATAGAGGCTGCTGAAGCTGTGAAGAATCAAGCCAAAGAACTTGAACAGGCATTATCTCAAAAAGCTATAGGATATGAGGCATGGAAACAAGAACTAGAGCATGCAAGAAAAGAGTACACAACAACAGTAAAGGAACTAGATGCTTCCAAGCAAGAACTCAATAAAATCAGGCAGGATTTTGACACAGCTTTGGAGGCAAAACTGGCTGCATTCCAAACAGCGGGAGAGGCTCAGCGTTCTGCAAAATTGAACTCAGAAAAGCTCCAAGAACTCTCAAACCAAATTGCAACCATGAAAGAACAAATTCAACATTTGAAGGTTGCCTCATCACAAGCCCAAGATGGTCAGGTAAAGGCCATGGAAGAAAGAGAAGCACGAGTAAGTTTCTACAAAAATGCCAAGGAAGAAGCAGAGAATAAATTGATGGCTTTGAAGAAGGAGTGTGACGAGGAACTAACACAGGGTCTAGAGGCCAAACTTCATGAAACAAGTAAAGAGATTCAGATTCTCCAAGAGCAGGTGAAACAGGCACATGCTTCAGAGATGGATACAGTGAGAGTTATAACTTTGGAGATCGAAGAAGCCAAAAAAACACTTCAGGAAGTTGTGGAAGAGGAAACCTCCCTGAGAAACCTAGTGGATCTACTTAGGACAGAGTTAGAACAAGTCAAGAAAGAGCAAGAGGATATCAAGGAGAAGCAAAAGGCAGCAGAAGCCCATGCTTGTACCCTAACTGATGAACTACGGAAAGGATCTGAAGAGACAAGTTCTGCGGCGGACAAAGAATCTGAAAACTGTGCTCAAGTAGAATTGAGGATCAAACAGCTTTCATTTGAGACAGAAGTTGCAAGAAAGGAAGAAGAAGAAATAAGAAGCAAAACTCAAGAGCTGAAGCATGAGGCTGAAAAATCCAAAGCTGTGGCAGAAGAATTGGAGAAGAAACTTGAGCTTTATATGAAACAGGCTGAGGAAGCCAGAGAAGCAGAACGAAAAGCCATTGTGGCGATGAAGATGATGTCTGAAAGTGTGGACAATCAAGACACGTCCTCAGTTTTAGATGCTAATGGAAAGATTGTGTTGACAGTTGATGAGTTTGCAGCATTGAGTGGGAAAATCAAGGAGTCTGAAGACTTGATTGACAGAACAGAAACAGCATCCATGGCTCAGGTGGAAGCAATAAACTTAAGAAAGAATGAAGTGAACAAAAAGGTGGAGGCAAACCTGAAAGCAATTGAGGAAATAAAGGCTGCAACAGACATGGCTCTGAAGAATGCAGAGATGGCAGATTCTGCTAAGGTTGTAGTTGAAAACGAACTAAAGAAGTGGCGTCTAGAAGAACAAGGCTTGGAAGGCACAGAAAATTCTCCAAGATCAATCTCTCTGCGTATTTAA 1740 0.4172 MSFRVRDQEKESDSPREVGEIDTRAPFQSVRAAVSLFGEVAVSKDKRSFKRRSSENVLEKETQLLLAQRELTTIKKKLDSSEITKGKALSELDRANLTLQELEKKLNSVRQSKQSAIEAAEAVKNQAKELEQALSQKAIGYEAWKQELEHARKEYTTTVKELDASKQELNKIRQDFDTALEAKLAAFQTAGEAQRSAKLNSEKLQELSNQIATMKEQIQHLKVASSQAQDGQVKAMEEREARVSFYKNAKEEAENKLMALKKECDEELTQGLEAKLHETSKEIQILQEQVKQAHASEMDTVRVITLEIEEAKKTLQEVVEEETSLRNLVDLLRTELEQVKKEQEDIKEKQKAAEAHACTLTDELRKGSEETSSAADKESENCAQVELRIKQLSFETEVARKEEEEIRSKTQELKHEAEKSKAVAEELEKKLELYMKQAEEAREAERKAIVAMKMMSESVDNQDTSSVLDANGKIVLTVDEFAALSGKIKESEDLIDRTETASMAQVEAINLRKNEVNKKVEANLKAIEEIKAATDMALKNAEMADSAKVVVENELKKWRLEEQGLEGTENSPRSISLRI 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01246 579 Coils Coil 197 224 - -
Vimu2g01246 579 Coils Coil 85 137 - -
Vimu2g01246 579 Pfam Weak chloroplast movement under blue light 20 562 IPR008545 -
Vimu2g01246 579 Coils Coil 301 356 - -
Vimu2g01246 579 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 19 563 - -
Vimu2g01246 579 MobiDBLite consensus disorder prediction 1 20 - -
Vimu2g01246 579 Coils Coil 141 182 - -
Vimu2g01246 579 Coils Coil 399 447 - -
Vimu2g01246 579 MobiDBLite consensus disorder prediction 1 23 - -
Vimu2g01246 579 Coils Coil 236 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01246 Vimu-Chr2 8318730 8321027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01246 - - gmx:100818297 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01246 2 8318730 8321027 Vimu2g01246 2 8318730 8321027 ECH
Vimu7g01970 7 17776610 17778495 Vimu2g01246 2 8318730 8321027 PCT