Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01130 ATGGCATCATCAGCAGCGCCGTCGCTGAAAGCGGTACTGGACCGCGTCCAAGGGGCTACTGAGCGCTCTGGCCGGAATTTACAAGAGATCCGTGTTGTGGCGGCTAGCAAGACCAAGTCAGTTTCTGCTCTCCGTCGGGTATACGACGCGGGCCATAGATTCTTCGGCGAGAACTACGTTCAGGAACTCCTTCAAAAAGCTCCTCAGCTTCCCGTTGACATCGAGTGGCATCTCATTGGCAATTTGCAGAGTAACAAAGTCAAGCCTCTTATCGCTGGTGTTCCCAACCTTGCTTGTGTAGAAACTGTGGATGACGAGAAGATAGCAAATCTTCTTGATCGTGCTGTAGCGACTGTTGGCAGGAAACCGTTAAAGGTTTTTGTTCAAGTGAATACGAGCGGAGAAACCTCTCTGTGTGTGGATCTTGTAAAGCACATCACAAACTGCCCAAATCTTGAGTTTTCTGGTCTAATGACAATTGGCATGCTGGATTATTCATCCACCCCTGAAAATTTTAAGGTGGCGAATATGTTGTCCAATTGCAGAAGTGAAGTTTGTAAAGCACTTGGAATACCAGAAACGCAATGTGAGCTATCAATGGGCATGACTGGGGACTTTGAGCAAGCTATCGAGATGGGAAGTACAAATGTTAGGATTGGGACTGCCATATTTGGAGCCAGAGAATATCCAACGAAAGACGAGAAGTAG 708 0.4732 MASSAAPSLKAVLDRVQGATERSGRNLQEIRVVAASKTKSVSALRRVYDAGHRFFGENYVQELLQKAPQLPVDIEWHLIGNLQSNKVKPLIAGVPNLACVETVDDEKIANLLDRAVATVGRKPLKVFVQVNTSGETSLCVDLVKHITNCPNLEFSGLMTIGMLDYSSTPENFKVANMLSNCRSEVCKALGIPETQCELSMGMTGDFEQAIEMGSTNVRIGTAIFGAREYPTKDEK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01130 235 Gene3D Alanine racemase 1 235 IPR029066 -
Vimu2g01130 235 NCBIfam YggS family pyridoxal phosphate-dependent enzyme 9 227 IPR011078 GO:0030170
Vimu2g01130 235 Coils Coil 232 235 - -
Vimu2g01130 235 Pfam Alanine racemase, N-terminal domain 29 227 IPR001608 -
Vimu2g01130 235 SUPERFAMILY PLP-binding barrel 5 225 IPR029066 -
Vimu2g01130 235 FunFam Pyridoxal phosphate homeostasis protein 1 234 - -
Vimu2g01130 235 CDD PLPDE_III_YBL036c_euk 9 225 - -
Vimu2g01130 235 PIRSF YBL036c_PLPDEIII 2 233 IPR011078 GO:0030170
Vimu2g01130 235 Hamap Pyridoxal phosphate homeostasis protein. 7 226 IPR011078 GO:0030170
Vimu2g01130 235 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 4 232 IPR011078 GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01130 Vimu-Chr2 7464486 7466983 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01130 K06997 - gmx:100527295 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01130 2 7464486 7466983 Vimu2g01130 2 7464486 7466983 ECH