Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00670 ATGGATTCCAATCATTCCATATCCCCGAGACACCAAGACAATCACAAACCATGGCAGGGACTGCAATCTCCCAAAGCCGTCGCTAGATCCGAACCCGGAAGCCCGTACCCGACAACGTTCGTCCAAGCAGACACGTCGTCGTTCAAGCAAGTAGTCCAAATGCTGACAGGCTCCTCGGAGACAGCGAAACAAGCTTCCTCGAAACCCGCCGCCAACCCGACCCACAGCATCCCGCCCATGAAATCCGTTCCGAACAAGAAGCAGCAGTTCAAGTTGTACGAGCGGAGGACGAACTCCCTGAAGAACAACCTCAACATCAACCCCCTCACCTCGTTTTTCTCGCCTCGCAAACCCGACATGCTCTCCCCCAGCATCCTCGACTTCCCCGCACTCGTCCTGAGCCCCGTCACACCCCTCATACCCGACCCGTTCGACCGATCCAACGCGCCCCCTTCCCTGGACTCCGAGGCCGAAGATAAAGCCATAAAGGAGAAGGGTTTCTTCTTACACCCTTCTCCCGCTTCTACTCCCAGAGACGCCGAACCTCGCTTGCTCCCTCTCTTCCCCACCACCTCTCCCAGAGCCTCAGGTCCTCCTCCTTCTTCTTCTACCGCTGCTTCTTGA 624 0.5705 MDSNHSISPRHQDNHKPWQGLQSPKAVARSEPGSPYPTTFVQADTSSFKQVVQMLTGSSETAKQASSKPAANPTHSIPPMKSVPNKKQQFKLYERRTNSLKNNLNINPLTSFFSPRKPDMLSPSILDFPALVLSPVTPLIPDPFDRSNAPPSLDSEAEDKAIKEKGFFLHPSPASTPRDAEPRLLPLFPTTSPRASGPPPSSSTAAS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00670 207 MobiDBLite consensus disorder prediction 152 166 - -
Vimu2g00670 207 MobiDBLite consensus disorder prediction 1 42 - -
Vimu2g00670 207 MobiDBLite consensus disorder prediction 140 207 - -
Vimu2g00670 207 MobiDBLite consensus disorder prediction 54 83 - -
Vimu2g00670 207 Pfam VQ motif 35 61 IPR008889 -
Vimu2g00670 207 MobiDBLite consensus disorder prediction 54 86 - -
Vimu2g00670 207 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 9 196 IPR039611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00670 Vimu-Chr2 3996186 3996809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00670 - - pcin:129286839 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00670 2 3996186 3996809 Vimu2g00670 2 3996186 3996809 ECH
Vimu11g03609 11 57958832 57961954 Vimu2g00670 2 3996186 3996809 PCT