Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00662 ATGAGTGGTGGGTCATTGGGTATTCGTTCTGGGAGTTATGGCTCTTTGGAGAAGCAGCTGCAGCTGCTGCAGCACAACGGCGTGTCTCCAATTCAATCAGCACGAAAGCCTCCCAAGACGCTGAAGGAGAAAGACAGGTTCTTCCTTTGGATCTTCAAGTTTGCGGGCAGAAAGAAGGTGGGAATGCTCTTTCTCTTTGCAATCTCCGCTGCCGTTTTCATCTGGGTTTTGTACCTTGGAAAAGGTGAAGATTCACAGGAGGGAAACGGTGTGCGTAATAACATTAAAGTTAATGAAAGTACGTCTATAGGTGATTCTCCATCTGTGATATCTGCTTCAAAAATCTTGGGATTATCCACAATTTTAGTTCTACCTCCTCCTCCCCCAAGCTATTTTCTGGGTTACACTCTTCCTCCTGGTCATCCGTGTAATAGTTTCACACTTCCTCCTCCACCGACAGACAAAAAGCGAACCGGGCCACGGCCCTGCCCGGTATGTTACCTTCCCGTGGAAGAAGCGATTGCACTTATGCCAAAGTTGCCGTCTCCTTCTCCAGTAATTAAGAACTTAGCATTTATCCATGAGGAAACTCTTAGCAGGGATGGTGAATTTGGTGGTTCGGACTTTGGTGGATATCCTACTTTGAGGCAGAGAAATGAATCTTTTGATATTCGAGAGTCAATGAGTGTGCACTGTGGATTTGTTAGAGGAACTAAACCTGGCCGCAACACAGGATTTGACATGGATGAAGATGACCTCCTCGAAATGGAGCAGTGTCATGGCATAGTTGTTGCATCGGCCATATTTGGAAATTTTGATGAGATAAATGAGCCAGCACATATAAGTGATTATTCAAAGGAGACAGTGTGCTTTCTTATGTTCGTTGATGAAGAAACAGAAAAATATTTGAGGAGTTCTGGTAGGCTGGGAATCAGCAAGAAGATTGGTTTGTGGAGAATTATTGTTGCTCATAATCTTCCTTATACAGATGCAAGACGCACTGGGAAGATTCCGAAGCTTCTGTTGCATAGAATGGTTCCAAATGCCCGCTATTCTATATGGCTTGATGGAAAGCTCGAGCTTGTTGTTGATCCATATCAAATCCTTGAAAGGTTTTTGTGGAGGAAGAATGCAACTTTTGCAATATCTAAACATTATAGACGATTCGATGTATTTACCGAGGCCGAGGCAAATAAAGCTGCTGGAAAGTATGATAATGCCTCTATAGACTTTCAGATTGAGTTTTACAAGAATGAGGGACTGACTCCATATACAGAGGCCAAACTTCCTCTTATAAGTGATGTTCCTGAAGGATGTGTAATTATAAGAGAGCATGTTCCCATTAGCAACCTTTTTACTTGTCTTTGGTTCAACGAAGTTGACCGATTCACTTCAAGAGACCAGATTAGTTTCTCAACTGTCAGGGACAAACTTTTGTCCAGGGTGGATTTTCATTTTCTCATGTTCTTGGATTGTGAAAGACGCAACTTTGTAGTTCAGAAATACCATAGGGATATATTGGAACGTCTGGCTGCTCCGGTGGCATTTGCTCTCAGTCCTCCATTGCAACGTGTGCATGAAACATCATCGGAAAAGGTTGCCAGGAGGGGGCCTGGAAAGCATGTAAAAGAACGGAGACCGAGTAGTAGGCGCCACCGGAAAGTTGTGGCCGGAGACAGGGACACACAAACATAG 1695 0.4383 MSGGSLGIRSGSYGSLEKQLQLLQHNGVSPIQSARKPPKTLKEKDRFFLWIFKFAGRKKVGMLFLFAISAAVFIWVLYLGKGEDSQEGNGVRNNIKVNESTSIGDSPSVISASKILGLSTILVLPPPPPSYFLGYTLPPGHPCNSFTLPPPPTDKKRTGPRPCPVCYLPVEEAIALMPKLPSPSPVIKNLAFIHEETLSRDGEFGGSDFGGYPTLRQRNESFDIRESMSVHCGFVRGTKPGRNTGFDMDEDDLLEMEQCHGIVVASAIFGNFDEINEPAHISDYSKETVCFLMFVDEETEKYLRSSGRLGISKKIGLWRIIVAHNLPYTDARRTGKIPKLLLHRMVPNARYSIWLDGKLELVVDPYQILERFLWRKNATFAISKHYRRFDVFTEAEANKAAGKYDNASIDFQIEFYKNEGLTPYTEAKLPLISDVPEGCVIIREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRDKLLSRVDFHFLMFLDCERRNFVVQKYHRDILERLAAPVAFALSPPLQRVHETSSEKVARRGPGKHVKERRPSSRRHRKVVAGDRDTQT 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00662 564 Pfam Protein of unknown function (DUF616) 190 503 IPR006852 -
Vimu2g00662 564 PANTHER ALKALINE CERAMIDASE-RELATED 44 504 IPR006852 -
Vimu2g00662 564 MobiDBLite consensus disorder prediction 539 553 - -
Vimu2g00662 564 MobiDBLite consensus disorder prediction 527 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00662 Vimu-Chr2 3915827 3920891 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00662 - - gmx:100792761 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00662 2 3915827 3920891 Vimu2g00662 2 3915827 3920891 ECH
Vimu11g03603 11 57825211 57839590 Vimu2g00662 2 3915827 3920891 PCT