Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00658 ATGGAAACTGTATCACTCAATCCTCTCTTCGTCTTCTTTCTTTTTTTCGGCCTTTTCTATTCCTCTGTTTCTATTAATCCTTCAGATTTAGCATTCAAGTCCACCTACAGCCGTCTCTGCAGCCACCTTGTCCCTGAACCGCCGGTGCATTCCGACGCCGGAAACGTCCCCGGCGTTGCCGACGATCTCCGGTTCCAATCCGGATATTTCTCCGGCGGCGATCGTAACTTTAACCGATCCGGCGCTTCGATGCACGCGTCCTTCCGCGTGACCTTGGTTCGCCGAAGCGGGAGCGACGGCGTTTTCGAATTGCGCGGGCAAATGCTTCTGCAGCAGCGTAGAGGAGCGACGCCGAGAAGGCTGCTCCGGCGAGTTTTTTCGTTCGGGAGAGTGACGCATTGGATGCGCGTTTCCCTGAGTGGATTTTGGTCTCCATTTTCCGGTAACCTTTGTATGTTCGGAACAGGATCTCATGCTAACCTGCGGAGTGCTAATGTTGTTCTTAAGCTTCGTTACCCTAGAGATTTGAGCCTTTTGAATTGTTTGATTCGTGGAACACTAGAAAGTTTTGATGACAACAATAGTTCGCAGTTCTTTGAGCCTATTTCGATATTGGCTTTGTCTCAGAGTTCGAAATACAAGTTTACAGTGTCTGGGAATGAAAGAGAGAAAGTTTGTGGAGGTGGAGGTGGATCAGATAGGGAGGGTTTGTCCCTTAGAAACTTAAACCGGGGTGCTTGCACTGCTTTTCTTGGACACACAGATAAGTTTGAATTGGAATACGGGAGTCAGTGTAGTAATGTTAGTTGCAATCCTGTCAGTGGTAATGGTAAAGAACTGCCTGGTTATATGTTTTTTCACGGCACTCTTTGTGCGGAGAGGGAGAAGGTTCAGATGCTGTTGGGTTTTTCTGATTCCGGCTACCGGGATGCTATATTTCCGTTTCATCCGAATACAACTTTGGTTTCTGAGGGGAAGTGGGATGACAAGGAGAATCGGCTATGTGCGGTTGCTTGCCGGATCTTGAACTTCACAGAATCTTGGCTTAGTCCTTATGTTGGAGATTGCAACGTTAGGCTCACTTTAAGTTTTCCTGCAATTTTATCTTTGAGGAACAGGAGTACAGTTTTGGGGCAAATTTGGAGTGACAAAGCGTTTGATGAACCTGGCTACTTCAGTAAAGTTGGATTCCAGGGTTCACCTAGGGTATCAAAAAGCCTCCATGGTTTCCAATACAAGTATACTGAAACTGAGAAGGTAAAAAAATCCTGTTTGCAGATGATGAATGCTGGAGGAAAGGGAAATACATATCCGAGTGGATATTCATCTGATATGGCATTTAGCATGTTAGTGACGAACAGCAAAGGGCAAGTGGCTCCAGGTTACACATCACCACTATCTGTAAATGATCAAATTTATAATGGACAGTCGTATGGGGCTCCAATTGTGTTGACAAATGAAAATTCAAAAGCACATGGAGTGCAATCAGAAAGTTACAATAATTTGTTTAATGTCAGCTATACCTTGAGTTTTAAACCCCCTCCTGATTTCAAGTTTGGTAGAGGTGTCCTGCCAACCGAAGTCAAAATTGGTGCTGAAGGGATTTACAATAAGAATAGTGGAGTTCTTTGTATGATAGGATGTAGGCGTTTGAGATCAACGGAAAAAGTACTGATAAAGAATGAGTCTCTGGACTGTGAAATCATGGTTAATGTTCAGTTTCCTCCTTTGAACACAAAAGGAGGTGAAGCTCTCAAAGGAACTATAGAAAGCACACGACAAAAGTCAGAGCCTTATTATTTTGATCCCCTTCAGTTGTCTTCATATTTCATTTACACAACCCAAGCAGATGCTTCCATTTTGAGAATGGATTTTGAGTTAATTATGGTGTTGGTATCAGACACACTTGCTTGTGTTTGTGTAGGATTGCAACTCCTCCACGTGAAAAAGCACCCAGATGTGCTTCCTTACATTTCTGTTGTGATGCTTGCTGTTATTACTCTAGGTCACATGATTCCCCTGATTTTGAATTTTGAAGCTTTATTCACGGGGAAGCACAGCGTGCAGAATACTTTCCTGGGGAGTGGAGGCTGGCTTGAAGTGAATGAGGTATTTGTGAGGATAGTGGCACTGGTAGCCTTTCTTCTAGAGTTGCGCCTCATACAATTGACCTGGTCCTCAAGACAGGTTGAGGGAAGCAATACAGGTCTCTGGGGTTCTGATAAAAAGGTCCTTTATATTATTCTACCATTGTACATTGGTGGTGGATTGACTGCTTGGTCGGTGCACATATGGAAGACTTCTTACCAGAAAAAATTTAGACCATTTCGGCTTTCGCGCCACAAGTTTAAGCTTCCTCGTGGGTTCGTATACCGACCTCCTTCCCTCTGGGAAGCCTTCAAATCTTACGCTGGTCTGCTCCTGGATGGTTTTCTGCTCCCACAGATTCTGTTTAACATAATGTTTAACTCAGAAGGGAAAACTCTAGCCTCTTCCTTTTACATTGGGACAACAATTGTTCGTACACTGCCCCATGTGTATGATCTTTTTAGAGCTCAGATTTCTGCATGGTACCTTGATTTGTCATACATATATGCAAACCATAGAATGGATTTTTATTCCACAGCCTGGGACATTATAATCCCTAGTGGTGCTATTTTATTTGCTCTTCTTGTATACTTTCAGCAGAAATTTGGCAGTCTGTGCATTCTTCCAAAGAGGTTCAGAGAAAGTTCTGCCTATGAGAAAGTACCTGTTATTGGCAATGACGATTTATAA 2778 0.4359 METVSLNPLFVFFLFFGLFYSSVSINPSDLAFKSTYSRLCSHLVPEPPVHSDAGNVPGVADDLRFQSGYFSGGDRNFNRSGASMHASFRVTLVRRSGSDGVFELRGQMLLQQRRGATPRRLLRRVFSFGRVTHWMRVSLSGFWSPFSGNLCMFGTGSHANLRSANVVLKLRYPRDLSLLNCLIRGTLESFDDNNSSQFFEPISILALSQSSKYKFTVSGNEREKVCGGGGGSDREGLSLRNLNRGACTAFLGHTDKFELEYGSQCSNVSCNPVSGNGKELPGYMFFHGTLCAEREKVQMLLGFSDSGYRDAIFPFHPNTTLVSEGKWDDKENRLCAVACRILNFTESWLSPYVGDCNVRLTLSFPAILSLRNRSTVLGQIWSDKAFDEPGYFSKVGFQGSPRVSKSLHGFQYKYTETEKVKKSCLQMMNAGGKGNTYPSGYSSDMAFSMLVTNSKGQVAPGYTSPLSVNDQIYNGQSYGAPIVLTNENSKAHGVQSESYNNLFNVSYTLSFKPPPDFKFGRGVLPTEVKIGAEGIYNKNSGVLCMIGCRRLRSTEKVLIKNESLDCEIMVNVQFPPLNTKGGEALKGTIESTRQKSEPYYFDPLQLSSYFIYTTQADASILRMDFELIMVLVSDTLACVCVGLQLLHVKKHPDVLPYISVVMLAVITLGHMIPLILNFEALFTGKHSVQNTFLGSGGWLEVNEVFVRIVALVAFLLELRLIQLTWSSRQVEGSNTGLWGSDKKVLYIILPLYIGGGLTAWSVHIWKTSYQKKFRPFRLSRHKFKLPRGFVYRPPSLWEAFKSYAGLLLDGFLLPQILFNIMFNSEGKTLASSFYIGTTIVRTLPHVYDLFRAQISAWYLDLSYIYANHRMDFYSTAWDIIIPSGAILFALLVYFQQKFGSLCILPKRFRESSAYEKVPVIGNDDL 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00658 925 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 10 920 IPR021319 -
Vimu2g00658 925 Pfam Protein of unknown function (DUF2921) 38 904 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00658 Vimu-Chr2 3883953 3886730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00658 - - gmx:100812795 1469.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00658 2 3883953 3886730 Vimu2g00658 2 3883953 3886730 ECH