Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00636 TTGTGTATGGCAGCTAGATTGTCGAGGCATGAGTTATCCGACCTCTGTCTTGGGAAACCGCCACTCAGATCCCTCTCCGTCGACGACACCGTAGCCGACGCCCTCGCCGCCTTAAAAAAGATCGACGACAACTACGTTTCCGTCTGGAACTGCCATCACTCCTTCATGAGGAAACCACAACCAAAGCACCAAACCACCATTTCCAAATGCACAACCTGCACCTGCATCGGTAAGGTTTGCATGGTCGACATCATCTGCTTCCTCTCCAAACCCCAAAACCTCTCCTCCCCTTCCGCCGCCCTCCATTCCCCCATCTCCGCCCTCCTCCACCAATCATCCTCTCTCCTCGTCCGCCACCTTCCACCCACTGCCAGTTTGGCGGAGGCTATAGATGTTATGCACGAAGGGGTGCACAACCTGGTGATACCAATACAGAATCAGTTCGAAGGTTTTGACTCCAACACTTTGCAGCACGATGACAAAACCATCTACTGTTGGCTCACCCAAGAGGATATCTTCCGATACCTCCTCAACTCAATCGGTCTGTTTTCCCCAACAGCGGCGAGCCCCATCAACACCTTGGGCGTCATCGACACGCAAAACCTCTTTGCAGTGTGCTACGACGACCCTGCGTCCTCTGTTTTGGACCTCTTGTCCCTGTCCCTCATATACCAAAGCTCCGTCGCCATTGTCGACCCCAACGGCAAATTCGTCGGCGAAATCTCGCCATCTGTACTCAACTCCTGCGATGAGGCCGTCGTGCCCGCCATGGCAACGCTCTCCGCCGGCGACTTCACTTCCTACATCGACTGCGGCGGCCCACCGGAGGACTTGGTGCAGTTGGTGAAGGAGAGGGTGGAAGACAAGAACCTCTCAGAGTTGCTCCCTGACGAAACGGGTCTTTGTTCATGGTCTTCTTTTTCTTCTAGTTGTTCCTCCGACGAAGATTCTTGCTCCGGGAAGAATTGGAAGCTTGGAGGGTACTCTGGGAGGGTGGGGAGAAGGTCTGAGGCGATGGTGTGCTACCGGTGGAGTTCTCTGGTGGCGGTGATGATCCAGGCTCTGGCTCATCGTGTGAGTTACGTGTGGGTTGTGGAAGAAGATGGAACCTTGACGGGCATTGTTACTTTCCAAGCAATGTTAAAAGTTTTCAGAGAGCACCTTAAATCCATGTGCTAA 1179 0.5369 MCMAARLSRHELSDLCLGKPPLRSLSVDDTVADALAALKKIDDNYVSVWNCHHSFMRKPQPKHQTTISKCTTCTCIGKVCMVDIICFLSKPQNLSSPSAALHSPISALLHQSSSLLVRHLPPTASLAEAIDVMHEGVHNLVIPIQNQFEGFDSNTLQHDDKTIYCWLTQEDIFRYLLNSIGLFSPTAASPINTLGVIDTQNLFAVCYDDPASSVLDLLSLSLIYQSSVAIVDPNGKFVGEISPSVLNSCDEAVVPAMATLSAGDFTSYIDCGGPPEDLVQLVKERVEDKNLSELLPDETGLCSWSSFSSSCSSDEDSCSGKNWKLGGYSGRVGRRSEAMVCYRWSSLVAVMIQALAHRVSYVWVVEEDGTLTGIVTFQAMLKVFREHLKSMC 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00636 392 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 7 387 - -
Vimu2g00636 392 Pfam CBS domain 119 177 IPR000644 -
Vimu2g00636 392 Pfam CBS domain 345 382 IPR000644 -
Vimu2g00636 392 SUPERFAMILY CBS-domain pair 199 388 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00636 Vimu-Chr2 3771182 3772887 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00636 - - gmx:100811855 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00636 2 3771182 3772887 Vimu2g00636 2 3771182 3772887 ECH