Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00583 ATGCGCACTTGGAAACATCTCCTGCTCTGGGCCGCTCTCATGTTTGCGGCCTTGGGAGTAAAAGTCTCTCTTCCCATCGCCGCCACCCACCTCCCTCTCCTATGGACCTTCCTCCTTCTCTGCTTCAAGCCTCCTTACCTCTTCCTCCTTCTCAACACCATCATCATCTCCATCGTTGCATCCTCCAGGTTCCACCACTCCAAACCTCAATCAGATCCAACTCCTCCGCCACTTTTTCAACCTAAATCCCTATCGGTTAACGCTTCACCCCTCCTCCAAGAACAAGAAGTGGAAAAAGAAATAATCCATCAAGAAATCACACTCAAGAGAACAGACTCAACGGAGATTCCTTCGTCCACGGAGAAGCCTCTCGTGTCTGCTAGGTTCACTCACCGGAAATTCCTTAAATCCACTTCTGAAGGTGGGAGAGCGTTGAAGGTGGTGGCCAAGGCCAAACGGCACGAAACGTTGGAGAGCACGTGGAAGGCCATAACGGAAGGTCGATCCGTGCCATTGAGCAGACACATGAAGAAGTGTGACACGTGGCAGAGCCGCGGCAACCTCGATCCGTCTCTTGAAAACAAGTCCGGCGAGATCTTAACCGACGTTTCCACCACCGGGAGACTGCGGAAAGAGCCGTCGCTGAGTCAAGAAGAGTTGAATCGGCGCGTGGAAGCGTTCATACGGAAGTTCAACGAGGAGATGAGGTTGCAAAGACAAGAATCGTTAGAACAGTACATGCAGATGGTTAGCCGCGGTGCTGCTTAG 768 0.5208 MRTWKHLLLWAALMFAALGVKVSLPIAATHLPLLWTFLLLCFKPPYLFLLLNTIIISIVASSRFHHSKPQSDPTPPPLFQPKSLSVNASPLLQEQEVEKEIIHQEITLKRTDSTEIPSSTEKPLVSARFTHRKFLKSTSEGGRALKVVAKAKRHETLESTWKAITEGRSVPLSRHMKKCDTWQSRGNLDPSLENKSGEILTDVSTTGRLRKEPSLSQEELNRRVEAFIRKFNEEMRLQRQESLEQYMQMVSRGAA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00583 255 Pfam Cotton fibre expressed protein 217 252 IPR008480 -
Vimu2g00583 255 MobiDBLite consensus disorder prediction 197 211 - -
Vimu2g00583 255 PANTHER COTTON FIBER (DUF761) 10 253 - -
Vimu2g00583 255 Pfam Domain of unknown function (DUF4408) 32 64 IPR025520 -
Vimu2g00583 255 MobiDBLite consensus disorder prediction 185 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00583 Vimu-Chr2 3418661 3419647 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00583 - - vra:106775373 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00583 2 3418661 3419647 Vimu2g00583 2 3418661 3419647 ECH