Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00521 ATGTTGTGTGTGTTAGGGTTTGTGAGTGTGGGTGATGTAGCCTACGCTCAAGACTCACAAGCTGACTACTTGAACGAACACAACGCTGCAAGGTCAGAGGTTGGTGTTGCAAGCATTGTTTGGGACGATACAGTTGCTGCTTTCGCACAAAGCTACGCAGATCAACGCAAAGGTGACTGCAATCTGATCCACTCTGGTGGTGATGGGAAATATGGGGAGAATCTTGCAGGAAGCAGTGGTGAGCTAAGTGGGAAGGATGCTGTGAAATTGTGGGTGGATGAGAAATCAAATTATGACTACAATTCCAACTCTTGTGTTGGTGGAGAATGCGGACACTACACTCAGGTTGTTTGGAGGAACTCTGTACGCGTTGGATGTGCGAAAGTAAGATGCAACAATGGAGGCACTTTCATCGGTTGCAACTATGATCCTCCTGGCAATTATGTTGGTGAAAGACCCTACTAA 465 0.4667 MLCVLGFVSVGDVAYAQDSQADYLNEHNAARSEVGVASIVWDDTVAAFAQSYADQRKGDCNLIHSGGDGKYGENLAGSSGELSGKDAVKLWVDEKSNYDYNSNSCVGGECGHYTQVVWRNSVRVGCAKVRCNNGGTFIGCNYDPPGNYVGERPY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00521 154 CDD CAP_PR-1 20 154 - -
Vimu2g00521 154 Pfam Cysteine-rich secretory protein family 24 142 IPR014044 -
Vimu2g00521 154 Gene3D CAP 17 154 IPR035940 -
Vimu2g00521 154 PRINTS Allergen V5/Tpx-1 family signature 39 57 IPR001283 -
Vimu2g00521 154 PRINTS Allergen V5/Tpx-1 family signature 137 150 IPR001283 -
Vimu2g00521 154 PRINTS Allergen V5/Tpx-1 family signature 87 100 IPR001283 -
Vimu2g00521 154 PRINTS Allergen V5/Tpx-1 family signature 110 126 IPR001283 -
Vimu2g00521 154 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 21 151 IPR001283 -
Vimu2g00521 154 FunFam Putative pathogenesis-related protein 1 17 154 - -
Vimu2g00521 154 SUPERFAMILY PR-1-like 14 154 IPR035940 -
Vimu2g00521 154 ProSitePatterns CRISP family signature 2. 137 148 IPR018244 GO:0005576
Vimu2g00521 154 ProSitePatterns CRISP family signature 1. 111 121 IPR018244 GO:0005576
Vimu2g00521 154 SMART SCP_3 18 150 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00521 Vimu-Chr2 3014565 3015029 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00521 K13449 - gmx:100806194 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00521 2 3014565 3015029 Vimu2g00521 2 3014565 3015029 ECH