Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00517 ATGTTTCTCAGTTCAGAAGAAGAGGATACTGAAGCTTGGGGAATAGAACCTTATGAGTTAGATGATGTTGGTGCGAAGTGTAAAAGTCTTGTACGCAAGGGCATTGTGCGAGTGGCTGATATAAAGTTTCCTCTACCTTATCGAGCAAAGTCATTTTCTCTGGTCCTTGTGTCAGATGCATTGGATTACTTATCTCCAAAATACCTGAATAAAACCCTGCCTGAGTTGGCAAGGGTATCTGCTGATGGCGTTATCATCTTTGCAGGTTATCCAGGCCAGCAGAGAACCAGGGGTGAAGAAGTGGCCAAATTTGGTCGTCCAGTAAGTGACTTTATTTTATTGAACTTGATGCTTTCTTGA 360 0.425 MFLSSEEEDTEAWGIEPYELDDVGAKCKSLVRKGIVRVADIKFPLPYRAKSFSLVLVSDALDYLSPKYLNKTLPELARVSADGVIIFAGYPGQQRTRGEEVAKFGRPVSDFILLNLMLS 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00517 119 Gene3D Vaccinia Virus protein VP39 11 111 IPR029063 -
Vimu2g00517 119 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 6 108 IPR044689 GO:0008168|GO:0045488
Vimu2g00517 119 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 35 93 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00517 Vimu-Chr2 2983064 2987666 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00517 K23871 - gmx:100800870 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00517 2 2983064 2987666 Vimu2g00517 2 2983064 2987666 ECH