Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00500 ATGGGGAAAAAACGTGTAATGTTGCCAGCCAAGGACGTTGACCTGTCCTCAGTTAAGTACCAACGTGAAATAGTACAAGCTCCGCATTTGACTGGATTTGTGTTTAGATTGTTTGTGAGGATTCTAGAAGCTCCGCTGATCGGCCCTATCATAATGGATGTTTTGAAGAAGCAAAATAAAATTGAAGAGATATTGCAGCACACCGTGATACCTGAGGAACCCATGTTTAAGCCTGAATATCCACCTCAAGGTGGCTCCCTCTCCTCACCTGTGAATGCATTGTTTCTTTTCAATATTGCAGTCTTAGGTGTTGTTGTCCTTGAAGAAGAAGGGAGTCCCGAAGATCGAGTTATATCTGCCTTGAAATGTCTTCCACATTATGATGTTGCTGAATTATGGGAAAATTCACATGCATCCTTTCGGTACTGGAAAATACGTGACTATGCTCATGCTTATCGATCTAAAAAAGTAACCCCATCCATGGTTGCTGAGCGCATCATCTCCATTATAGAGGAGAATGGAAGAAATAAACCTCCTATACCACTTTTGATATCCTTTGTGGCTGCAGAAGTCCGAGAGCAGGCAGCAGCATCTACACAGAGGTTTGAAGCAGGAAATCCACTATCGATATTGGATGGAATTTTTATGGCCATCAAAGATGACATAGATTGTTATCCTCATCCATCTAAGGGTGCATCGACATGGATGCATGAGGTGCGCACTGTAAAGAAGGATGCAGTTTGTGTTTCAAGACTGCGTAGCTGTGGTGTCATATTCGTAGGGAAAGCCAATATGCATGAGTTTGGAATGGGCACAACAGGAAATAATCCTAATTATGGAACTACAAGAAATCCTCATGCGCCTGATAGGTATACTGGTGGATCTTCTTCAGGTCCAGCTGCAATTGTTGCTTCTGGAATATGTTCTGCTGCATTGGGAACTGATGGTGGAGGTTCAATTCGTATTCCTTCTTCCCTTTGTGGTGTGGTGGGATTGAAGACAACATATGGACGGACAAGCATGGAAGGGTCATTATGTGATTCTGGAACTGTGGAAATTATTGGTCCCATTGCTTCATCAGTGGAGGACGTCATGCTAGTGTATGCAGCAATGTTGGGGGCATCACCTGCAAATAAAATCAGTTTAAGACCGCCACCACCTTGTTTGCCAACTCTGTCATCCAATGACTATTCAAATGCTTTGGGATCTTTAAGAATAGGAAAGTACAGTCCGTGGTTTAATGACGTGCATTCGACTGAAATATCTGATAAATGTGAGGACGCACTTAATCTGCTGTCAAAGGAGCATGGTTGTGAAATGATAGAAATCGTTATACCAGAGCTTCTTGAGATGCGAACTGCTCATGTCGTTTCCATTGGCTCTGAATGCTTATGTTCTCTGAATCCTGATTGTGCAGACGGGAAAGGTGCAAAATTGGCATATGATACTCGGACAAGTATGGCACTTTTTCGGTCATTTTCAGCAGCAGATTATGTTGCTGCCCAATGTATTAGACGAAGGCATATGTATTACCACATGGAGATTTTCAAGAAAGTGGATGTCATAGTAACTCCGACCACTGGCATGACAGCACCCATAATACCTCCTAGTGCTCTTAAAAGTGGTGAAACAGATATGCAAACTACAGCTAACCTTATGCAGTTCGTTGTTCCTGCAAATCTTCTGGGATTCCCTGCTATTTCTGTCCCGATTGGTTACGATAAAGAGGGACTTCCAATAGGTTTGCAAATAATGGGTCGACCATGGGCGGAAGCTACTATTCTGCGGGTAGCCGCTGCAGTTGAGAAACTCTGCGGCGAGTCGAAGAAAAAGCCTGCGTCATACTATGACGTTCTGAAGGCCAACTAA 1869 0.4334 MGKKRVMLPAKDVDLSSVKYQREIVQAPHLTGFVFRLFVRILEAPLIGPIIMDVLKKQNKIEEILQHTVIPEEPMFKPEYPPQGGSLSSPVNALFLFNIAVLGVVVLEEEGSPEDRVISALKCLPHYDVAELWENSHASFRYWKIRDYAHAYRSKKVTPSMVAERIISIIEENGRNKPPIPLLISFVAAEVREQAAASTQRFEAGNPLSILDGIFMAIKDDIDCYPHPSKGASTWMHEVRTVKKDAVCVSRLRSCGVIFVGKANMHEFGMGTTGNNPNYGTTRNPHAPDRYTGGSSSGPAAIVASGICSAALGTDGGGSIRIPSSLCGVVGLKTTYGRTSMEGSLCDSGTVEIIGPIASSVEDVMLVYAAMLGASPANKISLRPPPPCLPTLSSNDYSNALGSLRIGKYSPWFNDVHSTEISDKCEDALNLLSKEHGCEMIEIVIPELLEMRTAHVVSIGSECLCSLNPDCADGKGAKLAYDTRTSMALFRSFSAADYVAAQCIRRRHMYYHMEIFKKVDVIVTPTTGMTAPIIPPSALKSGETDMQTTANLMQFVVPANLLGFPAISVPIGYDKEGLPIGLQIMGRPWAEATILRVAAAVEKLCGESKKKPASYYDVLKAN 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00500 622 Gene3D Amidase signature (AS) domain 145 605 IPR036928 -
Vimu2g00500 622 PANTHER TRANSAMIDASE 136 619 IPR000120 GO:0003824
Vimu2g00500 622 ProSitePatterns Amidases signature. 293 324 IPR020556 -
Vimu2g00500 622 Pfam Amidase 184 595 IPR023631 -
Vimu2g00500 622 SUPERFAMILY Amidase signature (AS) enzymes 121 605 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00500 Vimu-Chr2 2841324 2849319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00500 1 622 Acyl Lipid Metabolism Gene Families AT5G64440 66.613 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00500 - - gmx:100778732 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00500 2 2841324 2849319 Vimu2g00500 2 2841324 2849319 ECH