Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00493 ATGGGTAGTAGCAGTAAGAAGAAGAGCTCCGTGGCCGAGGAACAAACCCTCGCCACCAACGATTCTCCCAAACCGCTCAACAAGAAATCCAAGAACACTGTCGCCTCCGGTGATGGCCAGCAAGAACCTTCAGTCAAGCCAATGGAGAGGAAGAAGAAGCGCAAAGCCTTGGACAAAAAGCGGCGCCGTACGTCATCACAACCGCAACCCGAACCTGTAGCTTCTGAATCCAAACCATTGCCTAGTACCTCCGGCGGCGCTCTCCCGGAGTTTCACATTGGTGTATTCAAGGACCTTGCGGCGGCGTCGGAGGCAGCGAGGGAAGCAGCCGCAAAACAAATGGTGACGGAGTTGAAGGCGGTTCAGAGCGCCTATGATACGCGTGAGGAGAAAGAGAATGGCGAGGGTGGATTCAAGTTGGAAGCGGAGAAAGACGATGGATTGGATAACTGTGCTCCGTCTGTGAGATACGCTGTTCGTAGGCTCATCCGCGGTGTTTCTTCGTCCAGAGAGTGTGCGCGACAAGGTTTTGCATTAGGTTTAACGGTTTTAGCTGGCACTCTTCATAATATTAAGGTTGAATCATTCCTTAAACTTGTGGTGAATTTGCTGGAAGTAACTTCATCAATGAAGGGTCAGGAAGCAAAAGATTGTCTATTAGGGCGCTTATTTGCCTATGGAGCTTTGGCACGATCAGGAAGACTTATGATGGAGTGGAATATAGATAAAAACACTCCTTACATAAGAGAATTTATTAATGTACTTATTTCTCTTGCCAATAAAAAGCGATACTTGCAAGAGCCGGTTGTTCTAATAATATTAGATATGGTTGAAAAGTTACCCGTTGAAGCCCTGGTGAATCATGTTCTTGAAGCTCCAGGACTGCATGAGTGGTTTGAAGCTGCTATAGAAGTAGGAAATCCCGATGCTTTGTTACTGGCTTTAAAACTTAGAGATAAGAGCTGTATGGACAGTTCATTGTTTGGCAAATTATTACCAAATCCATTCAGCTCTAGCCAGTTTTTCTCTGCTGATCACCTGTCTTCTCTAAGTAATTGCTTGAAGGAGTCAACATTTTGTCAACCTCGGCTTCATAGTGTCTGGCCAGTTTTGATAAATATTCTCTTACCTAATACTATTGTGCAAATAGAAGATGCAGCATCCGCTTCAAATTCATTAAAGAAACACAAAAAAAGCCGAAAATCTAGCTCTTCTGATGAAGAAATTGTGGGGAATCTTCAGTCTTTTTGTGAAATAATTATTGAAGAATCCCTTCTCATGTCATCTCATGACCGGAAACACTTAGCTTTTGATGTTCTCTTTCTTCTACTCCAAAAGCTGCCTGCGTCATTACTTCCTGTTGTTCTGTCATATAAAGTTGTTCAGTGCATGGTGGATGTACTATCCGCAAAGAACACATGGCTGTATAAAGTAGCTCAGCATTTTCTTAAACAGTTGTCAGATTGGGTGGGGGATGACGATGTCAGAAGAGTTGCTGTTATAGTGGCTATTCAGAAGCACAGCAGTGGAAAATTTGATCGTGTAACACGAACAAAACATGTTAAAGATTTTATGTCACAGTTCAAAACTGAACCTGGTTGCATGCTCTTTGTTCAGAACTTAATTAACCTGTTTGTGGATGAAGGTAACGCTGTGGAGGAACCTTCAGACCAGAGTCAAACCACAGATGAAAATTCTGAAATAGGATCTATTGAGGATAAGGATTCTCCCAGGTCCAATGGGAATTCTGACTTTTTGAAGAGTTGGATTATAGAATCCCTTCCCAGTATTTTAAAATTCTTGAAGCTAGATGATGATGAGAAGTTCCGAGTACAGAAAGAAATCATGAAGTTTTTGGCTGTTCAGGGTTTATTCACGGCCTCTCTTGGCTCTGAGGTAACGTCATTTGAGTTAGTGGAGAAATTCAGATGGCCAAAATCCCCCACATCAAATTCTCTCTGCAAGATGTGTATAAACCAGCTGCAATTGTTATTGGCAAATGCTCAGAAAGGGGAGGGCTCTCGTCCTTTGGCTAATAGCTCTGAGCCAAATGATCTTGGTTCATACTTCATGAAATTCTTTAGCACCTTTTGCAACATTCCTTCTGTTTCCCTCTTCCGGTCTTTAGATGATGTAGATCAAAAGGCATTAAAAAGTTTGCAGGCGGTGGAAACAAGATTATCCAGAGAGGAACGGAGCCATGATTGTAACACTGATGCTAATAAATTGCTTGCATTGAGATACTTGCTCATCCAACTGCTTCTGCAAGTACTTCTTTGTCCAGGGGAGTACGCCGAAGCTGCATCTGAACTCATTATTTGTTGTAAGAAGGCATTTTCTGATTCTGATCTTCCTGAGTCCTCTGGAGAAGATGTGGAGGTTGATGATGCTCCCGAACTGATGGACGTTCTTGTGGATACATTACTCTCTCTGCTACCACAATCATCAGCTCCTATGCGATCTTCCATAGAACAGGTATTTAAATATTTTTGTGGTGATATCACTGATGATGGACTGATCCGAATGTTGCGGATCATTAAGAAACAGATAAAGCCTGCAAGACATCCAGCTATAGCGAGTGCAGATGATGATGAGGAGGAGGAGGATGATGATGATGACTTTATCAATATTGAAGATGAAATTGATCAAGCTGAAACAGGTGAGAGTGACGTCCAGACAGATGACTCTGAGTCTGTTGTCGAGGTGGAGGAGGCTGATCATGGCCACTCTGAAGCTTCTGATGATTCTGATAGTGGGATGGATGATGATGCTATGTTCAGGATTGATACATATCTTGCCCAGATATTCAAAGAAAAGAAAAATCATGCTGGGGCTGAAACTGCCCATTCTCAGCTTGTGTTGTTCAAACTTCGAATCCTTTCATTGTTGGAAATCTTCCTTCATGAAAATCCAGGTAAGCCTCAGGTTCTTATGGTTTACTCAAATTTGGCTCAGGCGTTTGTTAACCCTCACACAGCAGAAGTTAGTGAGCAGCTTGCACAGCGAATATGGGGAATATTACAAAAGCAGATATTTAAAGCAAAGGATTATCCGAGAGGTGATGGTGTCCATTTATCCACTCTAGAATCTCTGTTGGAAAAAAGTCTAAAACTAGCTTCAAAACCATTTAAAAGACAGAAATCAAAGCAATCAGCTGCCTGGAACAGACAAAAAATGGTTTCATCTCTTGCCCAAACCTCGACCTTCTGGATTTTGAAAATTATTGATTCAAGAAATTTCTCTCACTCTGAATTGGAGAAGATTATTCAAATTTTCCGCGACGTATTAATGGGATATTTTGAAAATAAGAAATCTCAAATCAAATGTGGGTTTTTGAAAGAAATATTTCGAAGACGACCATGGATTGGACATGCTGTATTTGGCTTTATTTTGGAGAGGTGTGGAAGTGCCAAGTCAGATTTTCGACGAGTGGAGGCTCTTGATTTGGTAATGGAAATAATGAAGTCGCTGACGTCAGGCAACAGTGATGAACAGAATGCATCGAAAAAGATTCTTAAAAGCAATTTGGATAAACTTTCTCATCTAATGAAAGAATTAGCAACTAATGTGCCAAGTAAACCGGCAAGGCGGACAGAGGTACAGAAGTTTTATGTCAAGGTTTTGGAGATCCTGTCTAAGCTTAACCTCACCAAGCAATATTTTAAAGCTTTGGCACCTGATACCGAAGCTGCCCTTGAGGCTCAACTTGGTGAGCAATTCATTAGTTTGAAGAAGCTGGAGAAATAA 3747 0.4174 MGSSSKKKSSVAEEQTLATNDSPKPLNKKSKNTVASGDGQQEPSVKPMERKKKRKALDKKRRRTSSQPQPEPVASESKPLPSTSGGALPEFHIGVFKDLAAASEAAREAAAKQMVTELKAVQSAYDTREEKENGEGGFKLEAEKDDGLDNCAPSVRYAVRRLIRGVSSSRECARQGFALGLTVLAGTLHNIKVESFLKLVVNLLEVTSSMKGQEAKDCLLGRLFAYGALARSGRLMMEWNIDKNTPYIREFINVLISLANKKRYLQEPVVLIILDMVEKLPVEALVNHVLEAPGLHEWFEAAIEVGNPDALLLALKLRDKSCMDSSLFGKLLPNPFSSSQFFSADHLSSLSNCLKESTFCQPRLHSVWPVLINILLPNTIVQIEDAASASNSLKKHKKSRKSSSSDEEIVGNLQSFCEIIIEESLLMSSHDRKHLAFDVLFLLLQKLPASLLPVVLSYKVVQCMVDVLSAKNTWLYKVAQHFLKQLSDWVGDDDVRRVAVIVAIQKHSSGKFDRVTRTKHVKDFMSQFKTEPGCMLFVQNLINLFVDEGNAVEEPSDQSQTTDENSEIGSIEDKDSPRSNGNSDFLKSWIIESLPSILKFLKLDDDEKFRVQKEIMKFLAVQGLFTASLGSEVTSFELVEKFRWPKSPTSNSLCKMCINQLQLLLANAQKGEGSRPLANSSEPNDLGSYFMKFFSTFCNIPSVSLFRSLDDVDQKALKSLQAVETRLSREERSHDCNTDANKLLALRYLLIQLLLQVLLCPGEYAEAASELIICCKKAFSDSDLPESSGEDVEVDDAPELMDVLVDTLLSLLPQSSAPMRSSIEQVFKYFCGDITDDGLIRMLRIIKKQIKPARHPAIASADDDEEEEDDDDDFINIEDEIDQAETGESDVQTDDSESVVEVEEADHGHSEASDDSDSGMDDDAMFRIDTYLAQIFKEKKNHAGAETAHSQLVLFKLRILSLLEIFLHENPGKPQVLMVYSNLAQAFVNPHTAEVSEQLAQRIWGILQKQIFKAKDYPRGDGVHLSTLESLLEKSLKLASKPFKRQKSKQSAAWNRQKMVSSLAQTSTFWILKIIDSRNFSHSELEKIIQIFRDVLMGYFENKKSQIKCGFLKEIFRRRPWIGHAVFGFILERCGSAKSDFRRVEALDLVMEIMKSLTSGNSDEQNASKKILKSNLDKLSHLMKELATNVPSKPARRTEVQKFYVKVLEILSKLNLTKQYFKALAPDTEAALEAQLGEQFISLKKLEK 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00493 1248 Coils Coil 1169 1189 - -
Vimu2g00493 1248 MobiDBLite consensus disorder prediction 67 82 - -
Vimu2g00493 1248 MobiDBLite consensus disorder prediction 902 921 - -
Vimu2g00493 1248 MobiDBLite consensus disorder prediction 553 580 - -
Vimu2g00493 1248 MobiDBLite consensus disorder prediction 880 921 - -
Vimu2g00493 1248 MobiDBLite consensus disorder prediction 1 86 - -
Vimu2g00493 1248 MobiDBLite consensus disorder prediction 880 901 - -
Vimu2g00493 1248 PANTHER MYB-BINDING PROTEIN 1A FAMILY MEMBER 79 1245 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Vimu2g00493 1248 Pfam DNA polymerase phi 157 967 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Vimu2g00493 1248 MobiDBLite consensus disorder prediction 1 40 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00493 K02331 - gmx:100787296 2002.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00493 2 2800401 2807338 Vimu2g00493 2 2800401 2807338 ECH