Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02957 TTCCAAGGCTTCCCGGTGGCGCCGCCTCAGGGCCACCGTCTGTGGTGCAGTGCCACCTTATCACCGGAAGAAGCTACCGAGAACGCATCAGGCGGGACCCACACCCGAAGTTCTGACCTCGAGGTGGATGATCCGGAATGGAGGGACAAAGAGGAGAAGATTGTGAGAGACATTGAACCAATCGTTAAGCTAACCAGACATATTCTCTTCTCACCAAGGTACAAGAATGGGGAGCTATTGACTATGGAGGATGAAAGAGCCATAACAGAAAACGTTCTTATTTATCATCCAGATTATGAAGATAAAATCGGAAGTGGCTTGTTCGCCATTATGGTAAGTGGTGTGAATGATATGCATGATTAA 363 0.4793 FQGFPVAPPQGHRLWCSATLSPEEATENASGGTHTRSSDLEVDDPEWRDKEEKIVRDIEPIVKLTRHILFSPRYKNGELLTMEDERAITENVLIYHPDYEDKIGSGLFAIMVSGVNDMHD 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02957 120 MobiDBLite consensus disorder prediction 21 36 - -
Vimu1g02957 120 PANTHER PROTEIN EMBRYO DEFECTIVE 514 30 114 IPR044673 -
Vimu1g02957 120 MobiDBLite consensus disorder prediction 21 45 - -
Vimu1g02957 120 Gene3D - 51 120 - -
Vimu1g02957 120 Pfam Protein of unknown function (DUF3223) 73 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02957 Vimu-Chr1 41961365 41961821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02957 - - vra:106763761 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02957 1 41961365 41961821 Vimu1g02957 1 41961365 41961821 ECH
Vimu1g02957 1 41961365 41961821 Vimu10g03273 10 42989528 42996099 PCT