Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02861 ATGTGGTTGAACATTCACTCCCAATCACATGGCTTCTTCTTCTCCTCCTTCTCCCTCTTTTCTCACACACCTTCCTCTTCATCCTTCTTCTTCCTCTCAACAAGTGTTCGCATGCGGTGTGTTATCGGTGAGAAGCGTCTAGTGGAAGATGAATCGCCTGTTCCGATTCACATCGTGACGCTGGCCTCACAACTTCCCGTCGAGTTCCTTGAACCCTCCCCTCAATCGGAGCTCGTCATTGGCTTTGATTGCGAGGGTGTTGACTTGTGTCGCAAAGGCACTCTCTGCATAATGCAGCTTGCGTTTCCTGATGCTGTGTACTTGGTTGATGCAATTGAAGGGGGAGAAGAGCTTATCAAAGCGTGTAAGCCTGCACTTGAATCTAGTTACATCACAAAAGTGATTCATGATTGCAAACGGGACAGTGAGGCACTCTTCTTTCAGTTTGACATCAAGTTGAACAATGTGGTGGATACTCAGATTGCTTACTCACTAATAGAGGATCAAGAAGGACGAAAGAGATTGCGAGATGACTACATTTCATTTGTTGGCCTCCTTGCCGATCCACGTTATTGTGGCATATCATATGTTGAGAAGGAAGAAGTTCGTGACCTTCTTCGACAGGACCCTAAGTTCTGGACACACCGACCATTATCTGAACTAATGGTCCGTGCTGCTGCTGATGATGTTCGTTTTCTTCTCTACATTTATCACCAAATGATGGAGAAATTAAATGAGCGGTCTTTATGGTATCTTGCAGTTCGTGGTGCATTGTATTGCCGTTGTTTCTGTGTGAACAGTAACAATTTTGCTGATTGGCCATCTCTACCTTCGATACCAGATAGCTTGAATGCTGATGGTAATGGTCCCGAGGAGGAAATTCTTTCAGTTCTTGATGTTCCCCCTGGAAAGATGGGACGTGTTATTGGGAAAAGAGGGGCGACAATTTTGTTAATCAAGGCTTCTTGCAAGTAA 975 0.4503 MWLNIHSQSHGFFFSSFSLFSHTPSSSSFFFLSTSVRMRCVIGEKRLVEDESPVPIHIVTLASQLPVEFLEPSPQSELVIGFDCEGVDLCRKGTLCIMQLAFPDAVYLVDAIEGGEELIKACKPALESSYITKVIHDCKRDSEALFFQFDIKLNNVVDTQIAYSLIEDQEGRKRLRDDYISFVGLLADPRYCGISYVEKEEVRDLLRQDPKFWTHRPLSELMVRAAADDVRFLLYIYHQMMEKLNERSLWYLAVRGALYCRCFCVNSNNFADWPSLPSIPDSLNADGNGPEEEILSVLDVPPGKMGRVIGKRGATILLIKASCK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02861 324 Gene3D - 39 260 IPR036397 GO:0003676
Vimu1g02861 324 Pfam 3'-5' exonuclease 77 244 IPR002562 GO:0003676|GO:0006139|GO:0008408
Vimu1g02861 324 SUPERFAMILY Ribonuclease H-like 48 266 IPR012337 -
Vimu1g02861 324 ProSiteProfiles Type-1 KH domain profile. 293 324 - -
Vimu1g02861 324 SMART 35exoneu6 56 245 IPR002562 GO:0003676|GO:0006139|GO:0008408
Vimu1g02861 324 PANTHER EGALITARIAN, ISOFORM B 51 324 - -
Vimu1g02861 324 CDD Egl_like_exo 69 264 - -
Vimu1g02861 324 CDD KH-I 297 323 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02861 K18740 - gmx:100810098 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02861 1 40888963 40894149 Vimu1g02861 1 40888963 40894149 ECH