Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02842 ATGAAATTGATCAACCGAGTATCCGAGTTTAGCAAGGTGACTGAGTTAGTTTTCGACGATTCTCGAAATTTTATCTCGGAAATCGTTACTGAGTTGACTCGTTGTTTCGGTGGCTTGGCCAATTTGAATCAAAACCTCTTCCATTATCGATCACCGCCGTCGCTGTCGATGTCGTCTTATTCCGAGAACGATGCCGAGGCTCTCCGGCGCAAGCGCATCCTCTCCAGCAAGCTCTACTTCGACGTGTCCCCGTCCAAGGTTCCGCTAATCTACTCCGAATCCTATGACATATCGTTTCTCGGCATAGAGAAACTGCATCCGTTTGATTCGTCGAAGTGGGGACGCATTTGCCGATTCCTCGTTTCGTTTGGTATTCTCGACAAAGAAAGCATCGTTGAGCCTCTCGAAGCTTCCAAGGATGATCTTCTAGTGGTTCACGCAGAATTGTATCTGAATAGCCTGAAGGGGAGTTCAAAAGTTGCTATGATAGTTGAGGTCCCTCCCGTGGCATTAATTCCCAATTGTCTTGTGCAACAAAAAGTTCTTTTCCCATTCAAGAAGCAGGTTGGAGGAACTGTACTGGCTGCAAAACTTGCAAAGGAGAGAGGATGGGCCATTAATGTGGGAGGAGGTTTTCATCACTGCTCTGCAGAAAAAGGAGGTGGATTCTGTGTTTATGCAGATATTTCTCTTTGCATCCACTTTGCTTTTGTTCAGTTGAATATATCAAGGGTGATGATCATTGATCTCGATGCACATCAAGGAAACGGTCATGAAATGGACTTTGCCTACGATAGCCGAGTCTATATCTTGGATATGTACAATCCTGGAATTTATCCTTTGCATTGCTGGCTGGCATCTGACATGTCGCAGTGTCCTGATTACGAGGCGAGAAACTACATAAATCAGAAAGTTGAAGTAAAGAGTGGGACACTTACAGAAGAGTACCTGCAAAAATTAGACGAAGCACTAGAGGTTGCTGGGCGTAGGTTTAACCCTGAGTTGATCAGCCCCGAAGGAATTGCCCTTAGAGATGAAAAAGTTTTCCGGTTTGCTCGTGAGAAGAACATTCCCATCGTCATGCTCACTTCAGGTGGCTACATGAAATCAAGTGCTAAAGTGATTGCAGATTCTATAATCAATCTTTCTAATAAATGCTTGATAGAAACGGGTGGAGCTCCAAAGTCTGCGTGA 1194 0.4472 MKLINRVSEFSKVTELVFDDSRNFISEIVTELTRCFGGLANLNQNLFHYRSPPSLSMSSYSENDAEALRRKRILSSKLYFDVSPSKVPLIYSESYDISFLGIEKLHPFDSSKWGRICRFLVSFGILDKESIVEPLEASKDDLLVVHAELYLNSLKGSSKVAMIVEVPPVALIPNCLVQQKVLFPFKKQVGGTVLAAKLAKERGWAINVGGGFHHCSAEKGGGFCVYADISLCIHFAFVQLNISRVMIIDLDAHQGNGHEMDFAYDSRVYILDMYNPGIYPLHCWLASDMSQCPDYEARNYINQKVEVKSGTLTEEYLQKLDEALEVAGRRFNPELISPEGIALRDEKVFRFAREKNIPIVMLTSGGYMKSSAKVIADSIINLSNKCLIETGGAPKSA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02842 397 Gene3D Histone deacetylase domain 86 390 IPR037138 -
Vimu1g02842 397 PRINTS Histone deacetylase superfamily signature 244 259 IPR000286 -
Vimu1g02842 397 PRINTS Histone deacetylase superfamily signature 210 233 IPR000286 -
Vimu1g02842 397 Pfam Histone deacetylase domain 106 336 IPR023801 -
Vimu1g02842 397 CDD HDAC_classIV 106 382 IPR044150 GO:0004407|GO:0016575
Vimu1g02842 397 PANTHER HISTONE DEACETYLASE 2-RELATED 89 382 - -
Vimu1g02842 397 SUPERFAMILY Arginase/deacetylase 84 382 IPR023696 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02842 K11418 - gmx:100781276 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02842 1 40706903 40711878 Vimu1g02842 1 40706903 40711878 ECH