Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02835 ATGAGGGAAGAAAAAGAAAACCCTTCAGAGAACAGGTCCAAAGTTTCAAAATTTTCTGATCAAAACCAACCCCCAAAGCCTCAAACCACCAAGGGAACCAACCCCAACAACTACGGCTCCAAAACCAGGTTGTGGGGTGCTCACATTGTGAAGGGTTTCTCTGCTGACAAAAAAGCAAAGCCCTTTGCCACCAAAAAACAAACACTAACATCTTCAACAGCAACCTCGGAGAATGTCGTTGTTGCAAACCAGAAGAGCAACGGCAGCAACCCTTTTGTACCTTCTCATTCCAGAGTGAAGAGGTCTCTCATAGGTGACTTGTCATGTTCAATCAACCCTGCTCAGGTTCATCCACATGCATTCCCAACTCATAGGAGACAGTCTTCCACTGATTTGTTCACTGAGTTGGACCACATGAGGGGGTTGTTGCAAGAGTCTAAGGAGAGGGAGTCCAAGCTGAATGCTGAGCTTGCAGAGTGTAGGAAGAGGGTGAGTGAGGTGGATGAGATTGTGAAGAGGGTTGGTTTGTTGGAACAGGAGAAGGTCACTCTCACTGAGCAATTGGCTGCATTGACTTGTGAGGAAGTGAAAGGGGAAGTAGAACAGTACAAGGAAGTGAAAGTGCAGAATCTTGAGCTGGAAGTTGTGGAGTTGAGGAGGCTGAATAAGGAGCTGCAGATGCAGAAACGGAACCTCACTTGCAGGCTTTCTTCTATTGAGGCTCAATCACATTGTCCTGATAAATCTACTGAGAGTGACGTTGTTGCCAAAATTAAAGCCGAGGCATCTTTGCTGAGGATCACCAATGAAGACCTATGCAAACAAGTGGAAGGTTTGCAGATAAGCAGATTGAATGAGGTTGAAGAGCTTGCCTACTTGAGGTGGGTGAATTCATGTTTAAGAAACGAGTTGAAGAACACATGCTCAACATTGGATTCTGATAAGCCATCTAGTCCTCACACGGTTGTGAGCAATAGTGGAGATTGTCTGAGTTCTTTCTCTGATCAAGCCAATAGGTACTTAAATTGTGGCAGTGCAAATAGGTTCAACGTGATGAAGAAGCCAAAGAAGTGGCCCATAACATCACAAGAAGAGTTTCAAGGCAGTCTCATTGAGAAAAATTGTATTGAATCAGATGTTGCAGGGGGAAGCCCCAGAAGAAGGCACTCTATCAGTGGATCAAACTACTCAGAGGAAGAGGTTGTTTTGAGTAAGAGAAGACAGTCTGATTGTTTTGTATGTTCAAAGGAAATGGAAAAGGAATCAGTGTCATTGTCTTTTCAACAATCTAGTGTGGAGATTGTCCAAAGACCACAATATTTTGGAAATTCCCAAGAAGCTAACAAGCTTTTGGTTTCTTCAGATGTTGAGAAAAGGGCCCTACGCATTCCTAATCCTCCTCCAAGGCCTTCATGTTCTATTTCAAGCAAAATAAAACAAGAAAGTTCTGCTCAAGTTCTACCTCCCCCACCTCCACCTCCTCCCCCACCTCCTATGAATTTTGCATCAAAAAGTAACACAGCAACTGTGAAAAGAGCCCCACAAGTGGTGGAATTGTATCATTCACTTATGAAGAGAGACTCTAGAAAGGATTCTTCAAATGGAGGACTATCTGATGCACCGGATGTTGCTGATGTTCGTAGCAGCATGATTGGAGAAATTGAAAACCGTTCATCACACTTGCTTGCTATAAAGGCAGATATTGAGACTCAGGGAGAATTTGTGAATTCATTGATTAGAGAGGTGAAGAACGCAGTTTATCAGAACATAGAAGATGTAGTGGCATTTGTGAAGTGGCTAGATGATGAACTGTGTTTCCTTAAATATGATTGTGTGCTTTCAAAGGTTGATGAGAGAGCAGTCCTTAAGCATTTTGATTGGCCAGAGAAGAAAGCCGACACATTAAGAGAAGCAGCATTTGGGTATCAAGATTTGAAGAAATTAGAATATGAAGTTTACTCCTACAAGGATGATCCTCGTCTACCTTGTGATATTGCCCTAAAGAAAATGGTTGCATTGTCTGAAAAGATGGAGCGTACAGTTCATAACCTTCTTCGCACAAGAGAGTCACTAATGCGTCACTGCAAGGAGTTTCAAATTCCCATAGAATGGATGCTTGACAATGGAACTATTGGCAAGATAAAGCTAAGCTCAGTTAAATTGGCTAAAAAGTATATGAAAAGGGTAGCTATGGAACTTCAGGTAAAATCAGCATTAGAAAAAGATCCTGCAATGGATTACATGCTTCTCCAAGGAGTGAGATTTGCTTTTCGAATCCATCAGTTTGCTGGAGGATTTGATGCAGAAACAATGCATGCATTTGAGGAGCTTCGCAATCTGGCTTCTCTTCTTAACAAAACATAA 2364 0.4234 MREEKENPSENRSKVSKFSDQNQPPKPQTTKGTNPNNYGSKTRLWGAHIVKGFSADKKAKPFATKKQTLTSSTATSENVVVANQKSNGSNPFVPSHSRVKRSLIGDLSCSINPAQVHPHAFPTHRRQSSTDLFTELDHMRGLLQESKERESKLNAELAECRKRVSEVDEIVKRVGLLEQEKVTLTEQLAALTCEEVKGEVEQYKEVKVQNLELEVVELRRLNKELQMQKRNLTCRLSSIEAQSHCPDKSTESDVVAKIKAEASLLRITNEDLCKQVEGLQISRLNEVEELAYLRWVNSCLRNELKNTCSTLDSDKPSSPHTVVSNSGDCLSSFSDQANRYLNCGSANRFNVMKKPKKWPITSQEEFQGSLIEKNCIESDVAGGSPRRRHSISGSNYSEEEVVLSKRRQSDCFVCSKEMEKESVSLSFQQSSVEIVQRPQYFGNSQEANKLLVSSDVEKRALRIPNPPPRPSCSISSKIKQESSAQVLPPPPPPPPPPPMNFASKSNTATVKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVADVRSSMIGEIENRSSHLLAIKADIETQGEFVNSLIREVKNAVYQNIEDVVAFVKWLDDELCFLKYDCVLSKVDERAVLKHFDWPEKKADTLREAAFGYQDLKKLEYEVYSYKDDPRLPCDIALKKMVALSEKMERTVHNLLRTRESLMRHCKEFQIPIEWMLDNGTIGKIKLSSVKLAKKYMKRVAMELQVKSALEKDPAMDYMLLQGVRFAFRIHQFAGGFDAETMHAFEELRNLASLLNKT 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02835 787 Coils Coil 143 163 - -
Vimu1g02835 787 MobiDBLite consensus disorder prediction 14 41 - -
Vimu1g02835 787 Coils Coil 174 194 - -
Vimu1g02835 787 SUPERFAMILY Formin homology 2 domain (FH2 domain) 488 498 - -
Vimu1g02835 787 Coils Coil 208 242 - -
Vimu1g02835 787 MobiDBLite consensus disorder prediction 1 41 - -
Vimu1g02835 787 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 78 779 IPR040265 -
Vimu1g02835 787 MobiDBLite consensus disorder prediction 485 501 - -
Vimu1g02835 787 MobiDBLite consensus disorder prediction 461 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02835 Vimu-Chr1 40654508 40659632 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02835 - - gmx:100818641 1310.43