Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02811 ATGCAAGGCCTCCGCCGCTGCTCAAACGACGTCGTACACCTCGACCTCACCACTCCCACGCCGGCCACAACCAACTCCTCCACCACCTCATCCTCCTCCTCGCTCTCCATCGACGTGGAGGAATCCACGGAGGCGCGTATCCAGCGGCTCATATCGGAGCATCCGGTGATCATCTTCACGCGCTCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATAGGAGTCAACCCCACCGTCATCGAATTGGATGACCACGAGATAACGGCCCTCCCGGACGCCACCCGCACTCCCGCCGTCTTTATCGGCGGTTCCTCCGTCGGCGGCCTGGAGTCCCTCGTCGCCCTCCACGTCAGCGGCCACCTCGTCCCCAAACTTGTCCAAGTCGGCGCCCTCTGGGTATGA 414 0.6304 MQGLRRCSNDVVHLDLTTPTPATTNSSTTSSSSSLSIDVEESTEARIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVNPTVIELDDHEITALPDATRTPAVFIGGSSVGGLESLVALHVSGHLVPKLVQVGALWV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02811 137 Gene3D Glutaredoxin 37 136 - -
Vimu1g02811 137 NCBIfam glutaredoxin-like family 47 137 IPR011905 -
Vimu1g02811 137 ProSiteProfiles Glutaredoxin domain profile. 44 136 - -
Vimu1g02811 137 PANTHER GLUTAREDOXIN 46 136 IPR011905 -
Vimu1g02811 137 Pfam Glutaredoxin 56 109 IPR002109 -
Vimu1g02811 137 CDD GRX_GRXh_1_2_like 55 128 - -
Vimu1g02811 137 SUPERFAMILY Thioredoxin-like 44 136 IPR036249 -
Vimu1g02811 137 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02811 Vimu-Chr1 40422819 40424616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02811 46 137 Miscellaneous Gene Families AT4G15700 43.000 3.13e-25 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02811 - - vum:124825497 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02811 1 40422819 40424616 Vimu10g03145 10 42104102 42104840 PCT