Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02789 ATGGGGTTGACACGCAAGAGGGTATGGGACAAGGGTCCCACAGGGGGAACCCAGCGTGACCTTGTGGGTTGGTTTGGACCACTGGGGGTGGTTAAGATCTTGAGGGTGGGTCTAATATATTCCACTCAAAGGGTCAAGCCATGGTGGGACCCACTTCCATCCCCATTTTTGGTCGTAAGGTGGGATACTCGACACTCGGTAGTGCTTCCGGATAGCAACATTTTCTACATTATAGCCTTACTCCGATTTATTCCACCACCACCAAAGGGACCACCTACTGAACTCTTGGTCCAACAAAACCATGAGATTATTCAGCTCTGCTGCAACAGAGCCTTTGATTTCAAGCTCTATCTCCCTCACTACCAGTCACAGGAGAACTGGATGCGACACTACGGAGACAAATGGACCAGATTCCTCGAGAGAAAGGCCATTTTTGATCCCTTCGCTCTTCTTGCACCTGGACAGAAAATTTTTTCCCGAATCCCTCAACCCTTGCCCATCACATAA 507 0.4931 MGLTRKRVWDKGPTGGTQRDLVGWFGPLGVVKILRVGLIYSTQRVKPWWDPLPSPFLVVRWDTRHSVVLPDSNIFYIIALLRFIPPPPKGPPTELLVQQNHEIIQLCCNRAFDFKLYLPHYQSQENWMRHYGDKWTRFLERKAIFDPFALLAPGQKIFSRIPQPLPIT 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02789 168 Gene3D - 54 117 IPR016170 -
Vimu1g02789 168 SUPERFAMILY FAD-linked oxidases, C-terminal domain 55 158 IPR016164 GO:0003824|GO:0050660
Vimu1g02789 168 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 55 158 IPR015345 GO:0009690|GO:0019139|GO:0050660
Vimu1g02789 168 Gene3D - 118 158 IPR016167 -
Vimu1g02789 168 PANTHER GULONOLACTONE OXIDASE 56 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02789 Vimu-Chr1 40202857 40204400 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02789 K00279 - gmx:100816566 204.527