Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02783 ATGGCTTCTCTCTCCGTTTCAATGGTTCTGCCACTCAGCTCCGGCAGCAAGAACAGGTCAAAGTCAAACTCTGCTCCCTCCGAAGCCTTCTTGAAGAGGAGTGCGGCGAAGAAATTGTCAGAGGCAGAACCAAAAAAGGTCAACATGGAAGCGTCTTTGAAGGAAAAAGCAGTGAAGGGTCTAACCGCTGCTGCAGTAACATCGGGCATGGTGATTCCTGAAGTGGCTCATGCAGCGGGATATGAATTCTCTCCTTCGCTCCAAAACTTTCTGCTAAGTATTGCTGCTGGTGGGGTTGTGCTCGTGGCGATATTTGGTGCTGTTATCGGAGTCGCCAACTTTGATCCAGTTAAGAGAACTTGA 363 0.4931 MASLSVSMVLPLSSGSKNRSKSNSAPSEAFLKRSAAKKLSEAEPKKVNMEASLKEKAVKGLTAAAVTSGMVIPEVAHAAGYEFSPSLQNFLLSIAAGGVVLVAIFGAVIGVANFDPVKRT 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02783 120 MobiDBLite consensus disorder prediction 1 29 - -
Vimu1g02783 120 PANTHER OS07G0673550 PROTEIN 1 120 - -
Vimu1g02783 120 Gene3D Single helix bin 83 120 - -
Vimu1g02783 120 Pfam Photosystem II reaction centre X protein (PsbX) 84 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02783 Vimu-Chr1 40106448 40108859 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02783 - - gmx:100305487 128.642