Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02772 ATGGATTTCAGGGTGATGGGTTTGGAATCCCCACTGTTCCACACGCTGCACCGCATGATGGACATGTCGGACGAGGGTGCAGGGGAGAAGACACACAATGCTCCGACACAGACATACGTGCGAGACGCGAAAGCGATGGCTGCAACAGCTGCGGATGTGAAAGAATATCCTAACTCCTACGTGTTCCTGATCGACATGCCGGGGTTGAAATCTGGTGACATAAAGGTTCAGGTTGAAGATGATAACGTGCTTTTGATTAGCGGGGAGAGAAAGAGGGAAGAAGAGAAAGAAGGGGTGAAGTATCTGAGAATGGAACGAAGAGTTGGGAAATTCATGCGCAAGTTTGTTTTACCTGAAAATGCAAACACTGATGCAATCTCTGCTGTGTGTAAAGATGGTGTTCTTAGTGTTACTGTGCAGAAATTGCCTCCTCCTGAACCTAAGAAGCCTAGGACCATTGAAGTGAAGATTGCTTGA 477 0.4738 MDFRVMGLESPLFHTLHRMMDMSDEGAGEKTHNAPTQTYVRDAKAMAATAADVKEYPNSYVFLIDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEGVKYLRMERRVGKFMRKFVLPENANTDAISAVCKDGVLSVTVQKLPPPEPKKPRTIEVKIA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02772 158 FunFam 17.3 kDa class II heat shock protein-like 11 157 - -
Vimu1g02772 158 SUPERFAMILY HSP20-like chaperones 33 150 IPR008978 -
Vimu1g02772 158 Gene3D - 5 157 IPR008978 -
Vimu1g02772 158 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Vimu1g02772 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 12 156 IPR031107 -
Vimu1g02772 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 156 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02772 Vimu-Chr1 39983551 39984027 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02772 K13993 - gmx:100813195 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02772 1 39983551 39984027 Vimu1g02772 1 39983551 39984027 ECH