Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02769 ATAATGATGAAATCTATGTTTGAGTGTGGAAACCAAGATGCTAATGTTGATGGTGGAGACCTTAATTGGAATAATGGTCATCTCCTACTGCAAGACATTCAAGAAATAAGCAAAGCCCTCTATGCTCCTTCTAGGCCTTCCTTTTCCTCTGTTCATAATCGATCCAAATCAGCGGGAAAAACCCGGTTGTCGAAATCTCAAGTTTCCTTAATCCCGGGATTTCTGAGGGATGATCTGTTGTCTAAGGACAAGAAGTTGTCTTCTGCGTGGAATTGGAAGAAGCCCTTGAAAGCTTTGACCCATATTGGTGATCAAAAGATCAAATGTTGCTTTAACCTTCATGTTCACTCAATTGAAGGTCTGCCTTTGAGTTTTGATAGCATTAGGCTGTGTGTGGTTTGGAAAAGAAAAAGCAACATTTTGCAGACTCGCCCCTCAAGGGTTATCCAAGGTGTTGTGGAGTTCAATGAAACTTTGAGTCATGGATGTTCTGTTTATGTTAGCCGCGCTGTCTCTGGTCACTCTCTCAAGTATGAGTCTAAGCGGTTCTTGATTTATGCCTTCATTGTTGGGGCACCAGAACATGACATAGGGAGCCATCAGGTGGATCTCACTAGACTTTTACCTCTGACATTGGCAGAGTTAGGGGGTGATAGAAGTTCAGGGAAATGGAGCACAAGTTTTAGGTTGGCAGGAAAAGCTGTGGGAGCTAGCCTAAATGTTAGTTTCAGCTATCAAATAGTGAAGGATGAGTTAATGCAATTTGGTGGTGATAATTTGAATGTTCTCAACCATATTAATATGAAGCCAGGCAGGCCAAGCAGCACAAGTATGGATTTGGGTCCTGGCCCTTTTCATTCTGATGATGTGATTTTATCCCGGGAAGCATTGATGAATTCTGGCTCAAGTCTTTCCAAATCAATCAGTTTCCTTTATCAAAAACTTGATGAGGAGAACATCCATGATTCAGTACGGGCAGACTCAAAACATTTTGAACCACTTAAATCTCATGTCATAGAATCAGAGTCACCTCAAGAATCAAATTTTGATGCTGATAACACTGAATTTTCCATTATAGAACAAGTAGAAACATTGGAAGGGGATCCCTTGAAAACTGATCAGGCAGGAAATCAAACGGTTGATTTGTCAACAGTTGAAATCATTAATGTAGATGATATTATTAAGGATGATGACATATCTGTTGACAAGAACACAAGTTTTGATTCAATGGATGACATATACACTAGTTGTGTAAATGGAAATGTGGCAGGTGACAGCAAACATAAATGCAGTAGTTCGTGTCTCAGTTTAACTTGCATCAAGGATGTAGATATACTTCCTGAGACATCAGAGTTTCTTGACCAAGAGCACTACCCTATTGTTAAATCAAATTATAAATCACACAGAATGGCAAAAAAATCAAGTAGCTTGGATTCTATCACTGAATCTATTGCAAATGATTTCTTGAAAATGCTGGCCATAGAGAGTGGTTCATTTGGCTCAAGTCGTGACGGGGATCCACATTCTCCCAGAGAGAAGCTTTTAAGACAGTTTGAAAAGGAGGCTCTAGCTTCAGGTTACTTTACTTTTGATTTCAATGCAAATGAAGAGGAATTGAAGACAGAGACGCTTGGACATAGCTATGACGATTGTACTGGGGATTCTGATTTGTCTTTATTTATTCAAGCTGCTGAAGAGGAGCATGCCAGGGAGAATCAGTTGTTAATGCAGAGGAGAAAGGCCAAAATTTTGGAAGACCTGGAGACAGATTCATTGATGCAACTCTGGGGTTTAAATGAGAGGGACTTTGAAAATTCTCCGAGAACTTGTTCTGGTGGGTTTGGAAGTCCAATTGAACTACCCAATGAAGAATCATGCATGTTACCTTCAATTGGACAGGGACTTGGTTCGTTTGTTCAAATTATGGGTGGAGGCTTCTTAAGGTCCATGAGTCCTTCCCTTTTCAAAAATGCTAAGAATTGTGGTAACCTCATCACTCAGGCTTCTAATCCTGTTGTTCTACCTGCAGAAATGGGTAATGATATACTGGATATACTGCAGCATGTGGCATCTGATGGAGTTGAAGAGCTGTGTCATCATATCTATAAATTGTTGCCTTTGCAAGATATCACTGGAAAATCCATTGAGCATATTTCGTGGGAAGCTATAACCAACAAAGGGACTCCTGGAAGGCAGACGACATGGCAGCACTATTCCTTTGATGAATTTCATTGTAACTATTTGACAGATGAAGGCATGAGCTTCGACACTGTATCTCTAGAAGCAATAGCTCCTATGACTGTTGATAAGATTGAATCCCTTTTGATAGAAGGGTTGAGAGTGCAGTCTGGCATGTTATACGAGGAGGCACCATCTTATATGCATCCCCAACATGCCAAGACGCCTTTAATCGGTAGCAGAAGAGCCAACTGGAAATGGTTTCCCGCATCAGAAAGAGGTGATAAAATGAAACTAGAAGATGGTGGAGAAATTGGTCATGATGATCATGGATTGATGGGACTGTCAGTAACATTAGATCAGTGGTTGAGATTGGATTCTGGCATTATTGAAGGAGATCAGAATTCAGAACAAATTTTGAAGATCTTACAAGTACACCATTCTAAAATCACAGAGTTACTGCATGATGGAGGGTTGAAAAATGCCATGGACCAGGTAAAAACATTTGGCAGAAAGCATGGACTCTTGGGGAACCACCTAACGGTGGCTTATATGATCCAGCTTAGGAATCCTCTGCGAAATTATGAACCAGTTGGTGCTCCAATGCTGGTTTTGACACAGGTGGAAAGGGTTAACATACATGTAATGCAGCAAGATGACAGCAATTTTCTGGAAAAAAAGGAAAAAGGAATGGAGAATGAGACCTTACTAAATGAAACAAGTGGCAAGCTTTTTGAAGATTCAAATACCGAAAATGAATCACCTCGATTTGGATTTAAAATCAGAGAGATTCATCTTTCAGGTGTCCTTACCAAATCCGGAAGCAAGCAACATTGGGGTACTGTAACTCAGCAACAGTCTGGGATCCGGTGGTTGCTTGCCAGTGGCATGGCTAGTACTGTCAAACATTCAACTTCAACATCACAGGCAATTGTTTTGTCATCTCCACCGTGTACCAAGAAGTTGCTGAATGAGGATACGCTCTGGAGCATTTCTTATGTCAATAATAGTAAAGAGCAGCTTGCTGAAAATGTACACATTCGGAACCCTGATATCATCTTCCCAAGTTGA 3249 0.4063 IMMKSMFECGNQDANVDGGDLNWNNGHLLLQDIQEISKALYAPSRPSFSSVHNRSKSAGKTRLSKSQVSLIPGFLRDDLLSKDKKLSSAWNWKKPLKALTHIGDQKIKCCFNLHVHSIEGLPLSFDSIRLCVVWKRKSNILQTRPSRVIQGVVEFNETLSHGCSVYVSRAVSGHSLKYESKRFLIYAFIVGAPEHDIGSHQVDLTRLLPLTLAELGGDRSSGKWSTSFRLAGKAVGASLNVSFSYQIVKDELMQFGGDNLNVLNHINMKPGRPSSTSMDLGPGPFHSDDVILSREALMNSGSSLSKSISFLYQKLDEENIHDSVRADSKHFEPLKSHVIESESPQESNFDADNTEFSIIEQVETLEGDPLKTDQAGNQTVDLSTVEIINVDDIIKDDDISVDKNTSFDSMDDIYTSCVNGNVAGDSKHKCSSSCLSLTCIKDVDILPETSEFLDQEHYPIVKSNYKSHRMAKKSSSLDSITESIANDFLKMLAIESGSFGSSRDGDPHSPREKLLRQFEKEALASGYFTFDFNANEEELKTETLGHSYDDCTGDSDLSLFIQAAEEEHARENQLLMQRRKAKILEDLETDSLMQLWGLNERDFENSPRTCSGGFGSPIELPNEESCMLPSIGQGLGSFVQIMGGGFLRSMSPSLFKNAKNCGNLITQASNPVVLPAEMGNDILDILQHVASDGVEELCHHIYKLLPLQDITGKSIEHISWEAITNKGTPGRQTTWQHYSFDEFHCNYLTDEGMSFDTVSLEAIAPMTVDKIESLLIEGLRVQSGMLYEEAPSYMHPQHAKTPLIGSRRANWKWFPASERGDKMKLEDGGEIGHDDHGLMGLSVTLDQWLRLDSGIIEGDQNSEQILKILQVHHSKITELLHDGGLKNAMDQVKTFGRKHGLLGNHLTVAYMIQLRNPLRNYEPVGAPMLVLTQVERVNIHVMQQDDSNFLEKKEKGMENETLLNETSGKLFEDSNTENESPRFGFKIREIHLSGVLTKSGSKQHWGTVTQQQSGIRWLLASGMASTVKHSTSTSQAIVLSSPPCTKKLLNEDTLWSISYVNNSKEQLAENVHIRNPDIIFPS 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02769 1082 ProSiteProfiles C2 NT-type domain profile. 99 247 IPR019448 -
Vimu1g02769 1082 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 105 249 IPR019448 -
Vimu1g02769 1082 MobiDBLite consensus disorder prediction 45 64 - -
Vimu1g02769 1082 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 24 1081 IPR039614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02769 Vimu-Chr1 39960788 39964131 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02769 - - gmx:102659940 1644.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02769 1 39960788 39964131 Vimu1g02769 1 39960788 39964131 ECH