Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02759 ATGGGTGAGAACACCGACGTTACCGTCACCACCAAAGCCAAAACCAAAACCCTTCTCTCTCTTCTAACACAACCAATCCAATGGCTGCAAATGCTCTCCTCAAAGCTAAATCCTTCCTTCGTCATCGGCGTCTTCCTCATCTACGGTTTAGGGCAAGGGCTCTCGGGCTCACTCTTCAAAGTAGTGGCGGACTACTACTGGAAAGACGTGCAGAAGCTTCAACCCTCCACCGTTCAACTCTTCGTAGGTGTTTACTTCATCCCCTGGGTTCTCAAACCTCTCTGGGGAATCCTCACCGACGCCTTCCCCGTTAGAGGATACCGTCGCCGACCCTACTTCATCATCTCCGGTCTCATCGGCACCGTCTCCGCCACCACTATCTCGCTCACCGGGAACCTCGCCGCCACAGCCGCGCTCATGTGCTTCCTTGGCGTGTCGGCGTCGCTCGCGATCGCGGATGTCACAATCGATGCGTGTATTGCGAGGAACAGCATCGAGGTGAGGGAGCTGGCGCCGGACTTGCAGAGCCTCTGCGGGTACTGCTCCGGCGCCGGCGCCCTCGTCGGATACCTCGCGAGTGGGTTCTTCGTGCACCGCCTCGGACCCCAGGAGTCGCTTGGTCTCATGGCGCTTTCTCCTGCTTTGACGATTGTGCTGGGTTTTGTGATTTATGAAAACAGAACTTCGCATATTGAAAAGAAACAGGCAGTGATGAAGAATGTAGGAACGACTATCAGAAGCATGTTCAAGACAATTAGGTATCCTCAAGTGTGGAAGCCTTCTCTGTTCATGTTCCTTTCCCTGGCTTTGAATGTAACCACCCACGAAGGCCATTTTTATTGGTATACAGATCCAAAACTTGGCCCTGCATTCTCTCAGGAGTTTGTAGGGGTGATCTATGCAATCGGTGCAGTGGCATCATTGATAGGGGTTTTAATCTACCACAAGGCTCTAAAAGACTACGCATTCAGAGACCTGGTATTCTATGCACAACTCCTATATGGCTTATCTGGTGTGCTGGATCTGATCTTCATCCTCCGTTGGAACTTGATCATTGGACTCCCTGACTACTTTTTTGTTGTCATTGAAGAAAGTGCTACAAGAATTACAGGCAAAATCAGATGGATGCCCATGCTGGTGCTGAGCACCCAGTTGTGCCCTTTAGGCATTGAGGGCACATTTTTTGCTCTGTTAATGTGCATTGATAGCATGGGTGCCCTCTTATCCAGGTGGGGTGGAGGGTTGCTGCTTCGTCTTCTCCACATCACCAGAACTGACTTCACAAACCTTTGGTTGGCTGTTCTCATAAGGGATATGCTCAGGTTTTCAGTACTTGCTTTGGTTTTTCTTGTCCCTAAAACAGGTCAATACGAGGAACTGCTTCCTTCTGATGTTTCAGAAAATAACACAGTTCATGATGTAGATGAAGAGAATTTGGAACTTCTCCCTTTCAATGGAAAGACTGAACTTTAG 1473 0.4963 MGENTDVTVTTKAKTKTLLSLLTQPIQWLQMLSSKLNPSFVIGVFLIYGLGQGLSGSLFKVVADYYWKDVQKLQPSTVQLFVGVYFIPWVLKPLWGILTDAFPVRGYRRRPYFIISGLIGTVSATTISLTGNLAATAALMCFLGVSASLAIADVTIDACIARNSIEVRELAPDLQSLCGYCSGAGALVGYLASGFFVHRLGPQESLGLMALSPALTIVLGFVIYENRTSHIEKKQAVMKNVGTTIRSMFKTIRYPQVWKPSLFMFLSLALNVTTHEGHFYWYTDPKLGPAFSQEFVGVIYAIGAVASLIGVLIYHKALKDYAFRDLVFYAQLLYGLSGVLDLIFILRWNLIIGLPDYFFVVIEESATRITGKIRWMPMLVLSTQLCPLGIEGTFFALLMCIDSMGALLSRWGGGLLLRLLHITRTDFTNLWLAVLIRDMLRFSVLALVFLVPKTGQYEELLPSDVSENNTVHDVDEENLELLPFNGKTEL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02759 490 Gene3D MFS general substrate transporter like domains 21 451 IPR036259 -
Vimu1g02759 490 NCBIfam folate/biopterin family MFS transporter 22 464 IPR004324 GO:0016020
Vimu1g02759 490 SUPERFAMILY MFS general substrate transporter 42 435 IPR036259 -
Vimu1g02759 490 CDD MFS_FBT 43 449 - -
Vimu1g02759 490 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 24 458 IPR039309 -
Vimu1g02759 490 Pfam BT1 family 257 454 IPR039309 -
Vimu1g02759 490 Pfam BT1 family 52 236 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02759 Vimu-Chr1 39841765 39844181 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02759 - - gmx:100806186 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02759 1 39841765 39844181 Vimu1g02759 1 39841765 39844181 ECH