Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02758 ATGAGACACAGATTATCTTCCATATTCCAATTAAAGAAAGGACCAAACTTGAGAAGTCTCTTGAGTTTGCAACCACCAAAAATGTCCTCCATGGCTTTCTCCACCACCTTCTTCACATCCCTCCATGATTTCACCCATGCCAGAACAAACCCACCAACTTCTCCTTCTTTTCCTTTCATCAAATCCTCCTTTGCTTCCTCCAACTCAACCTTTTTTCATCCTTCCCTTTCCCTACGAACCTCATCAACTTTTCCAAGGCTCTTCATAAAGCCTAGGTCTTTCTCAGTTCATGCCAGAGCTGCCACAGAAAAGACCATCTATGATTTTACTGTCAAGGATATTGACAGAAAGGATGTCGCTCTTAGCAAATTTAAGGGGAAGGTTCTATTGATTGTCAATGTTGCTTCACGATGTGGTTTGACGTCATCGAATTACTCGGAGCTGTCTCGTTTGTATGAAAAGTATAAAGATCAAGGAGAGAAGTGTGTCCCTCCTTTGCGACTTCGGGCACAATTTATTGGTACCTTTAGATTGGATACTGATGTAAATGAAGTTTACTGGCTGGGGTCTGTTTCTCACATGTTAACTCTCCTCTACTACGCAGCTCTATTGATATGCTACACATATCTAGTGTCCTTATGCTGCTCCTTTTCAGGTTTGGAGGTTCTAGCTTTCCCCTGCAATCAATTTGGTATGCAGGAGCCTGGATCGAATGAAGAAATTAAGCAGTTTGCTTGCACTCGATATAAAGCAGAATTTCCAATTTTTGACAAGGTGGATGTCAATGGACCATTTACGGCTCCAGTGTACAGTTTTCTGAAATCTAGTGCTGGAGGCTTTCTGGGTGATCTTATAAAGTGGAATTTTGAGAAATTCTTGGTTGATAAAAATGGTAAAGTTATTGAAAGATACCCACCAACAACGTCGCCTTTCCAAATTGAGGTATGA 948 0.4114 MRHRLSSIFQLKKGPNLRSLLSLQPPKMSSMAFSTTFFTSLHDFTHARTNPPTSPSFPFIKSSFASSNSTFFHPSLSLRTSSTFPRLFIKPRSFSVHARAATEKTIYDFTVKDIDRKDVALSKFKGKVLLIVNVASRCGLTSSNYSELSRLYEKYKDQGEKCVPPLRLRAQFIGTFRLDTDVNEVYWLGSVSHMLTLLYYAALLICYTYLVSLCCSFSGLEVLAFPCNQFGMQEPGSNEEIKQFACTRYKAEFPIFDKVDVNGPFTAPVYSFLKSSAGGFLGDLIKWNFEKFLVDKNGKVIERYPPTTSPFQIEV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02758 315 SUPERFAMILY Thioredoxin-like 218 314 IPR036249 -
Vimu1g02758 315 PANTHER GLUTATHIONE PEROXIDASE 98 159 IPR000889 GO:0004602|GO:0006979
Vimu1g02758 315 ProSitePatterns Glutathione peroxidases signature 2. 223 230 IPR029760 -
Vimu1g02758 315 SUPERFAMILY Thioredoxin-like 105 159 IPR036249 -
Vimu1g02758 315 ProSitePatterns Glutathione peroxidases active site. 126 141 IPR029759 -
Vimu1g02758 315 CDD GSH_Peroxidase 105 314 IPR000889 GO:0004602|GO:0006979
Vimu1g02758 315 Gene3D Glutaredoxin 195 315 - -
Vimu1g02758 315 Pfam Glutathione peroxidase 207 274 IPR000889 GO:0004602|GO:0006979
Vimu1g02758 315 Pfam Glutathione peroxidase 106 159 IPR000889 GO:0004602|GO:0006979
Vimu1g02758 315 ProSiteProfiles Glutathione peroxidase profile. 96 315 IPR000889 GO:0004602|GO:0006979
Vimu1g02758 315 Gene3D Glutaredoxin 92 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02758 Vimu-Chr1 39837188 39839723 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02758 K00432 - gmx:100305775 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02758 1 39837188 39839723 Vimu1g02758 1 39837188 39839723 ECH