Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02755 ATGGTGAAAGGAAGCGAAATTGATGGCATAGAAGTACCAGAAGCAGTGATGGAGACTCTGAACCGCACTTTGGGAAGCCTTCAACAGCTGGAGACTGAGTTACCCCAATTCCTCGCTCTCTCTGACCCTGACCTTCTCGCTCAACTGTCATTTCTCCAACGCGCTCACTCACTTTTCTCACTCGCCAAACTCACTTCCACCCTCTTCTCATTGAAGTTGAGGTGCAGAGGAATTAACCCAAATGATCATCCTGTGAAATCCGAGCTTTTGTTCAAGTTTCGGCCTTTGGTGATTTGTGTTGTGCTGTGTTGCTTGATTTATGATTTTGCTTTTTTGTTCCTCCAGGACAAGTTAAACGTGTTGCAGAAGAAACTGGAGCCACTTCGGCGGTTGATTGAAGCACAGGAGCAAGACATTAGGAACATGAATGGAGAGGAGGGACTAGAGATGAACTATGAGGAGCAGGCTGGTAAAAAGAGGAAGTATCCATCTTCTGAAGAGCCATCTATTCAAATTGATGAAATGGAGTCCTTGGAGAAAGTAAAGGAGGAACATCTTGGTTATAATAGTGGAAATGTTAAGGGAATAGTAATTGACATTTCAGATGATGATGAGGTACTTGAACCTTAA 630 0.4365 MVKGSEIDGIEVPEAVMETLNRTLGSLQQLETELPQFLALSDPDLLAQLSFLQRAHSLFSLAKLTSTLFSLKLRCRGINPNDHPVKSELLFKFRPLVICVVLCCLIYDFAFLFLQDKLNVLQKKLEPLRRLIEAQEQDIRNMNGEEGLEMNYEEQAGKKRKYPSSEEPSIQIDEMESLEKVKEEHLGYNSGNVKGIVIDISDDDEVLEP 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02755 209 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 8 89 IPR011082 -
Vimu1g02755 209 Coils Coil 118 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02755 Vimu-Chr1 39796634 39797863 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02755 K12592 - gmx:100500667 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02755 1 39796634 39797863 Vimu1g02755 1 39796634 39797863 ECH
Vimu1g02755 1 39796634 39797863 Vimu10g03043 10 41340634 41341875 PCT