Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02750 ATGCAGAGATTCAAAGCTCTGCTACCGCAAAAAAGGGTCTCACTTCGCTCTATCTATTCTTACCATCGAGCTTTCTCTGCTCAACCAAATTACGCAGAGCAGGACGATGACGATTCTCAGGAGCAGATTCTAGTCGAAGGAAGAGCAAAATCACGAACAGCTATTCTTAACAGACCTTCTTCGCTGAACTCGTTCAATGCGTCCATGGTTGGTCGATTGAAGAGGCTGTATGATTCGTGGGAAGAGAACTCTAACATTGGATTTGTTTTGATGAAGTTAGATGATGCCAAGGGACTAGATCACTCTTCTATGCTGATGGCATCTGTATCTCAAGTTGCCATTTTGGATGGAATAACAATGGGATGTGGATCTGGAATTTCTCTACCAGGGATGTTTCGTGTTGTAACAGATAAAACGGCTCAAATAGGTTTCCACCCAGATGCAGGAGCTTCTTATATTTTGTCTCGGCTACCTGGCTACTTGGGGGAATACTTAGCTCTTACTGGAGATAAGCTTAATGGTGTTGAAATGATTGCCTGCGGCCTTGCTACTCATTATTCATTAAATGCAAGGCTTACTTTGCTTGAAGAACAACTCGGTAAACTAACCACAGATGAACCTTCTGTTGTTGAGGCATCCCTTGCACAGTATGGTGATATTGTTTACCCAGATAAGGGCAGTGTCCTTCACAGGTAG 696 0.4339 MQRFKALLPQKRVSLRSIYSYHRAFSAQPNYAEQDDDDSQEQILVEGRAKSRTAILNRPSSLNSFNASMVGRLKRLYDSWEENSNIGFVLMKLDDAKGLDHSSMLMASVSQVAILDGITMGCGSGISLPGMFRVVTDKTAQIGFHPDAGASYILSRLPGYLGEYLALTGDKLNGVEMIACGLATHYSLNARLTLLEEQLGKLTTDEPSVVEASLAQYGDIVYPDKGSVLHR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02750 231 Pfam Enoyl-CoA hydratase/isomerase 52 94 IPR045004 -
Vimu1g02750 231 Pfam Enoyl-CoA hydratase/isomerase 109 221 IPR045004 -
Vimu1g02750 231 SUPERFAMILY ClpP/crotonase 40 190 IPR029045 -
Vimu1g02750 231 CDD crotonase-like 43 185 - -
Vimu1g02750 231 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 37 223 IPR032259 GO:0003860
Vimu1g02750 231 Gene3D - 36 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02750 Vimu-Chr1 39723339 39734802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02750 1 231 Acyl Lipid Metabolism Gene Families AT4G31810 59.779 2.93e-99 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02750 K05605 - gmx:100808892 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02750 1 39723339 39734802 Vimu1g02750 1 39723339 39734802 ECH