Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02749 ATGTGGGACCCACACGTTTGTCTTAGGTTGTGGCAAGTTCCAACTAGGAAGGAAGATGGCAACACCAACACACAACTTTCTTCTTTTCAATCCACAAATGTCTTTTCTTTCCTTCATTACCAATTTATTAATCCCTTTCACCCTTTATCTTCCTCTCTCTCATTTCTGTGTTATATAAAGTATAAACCTCAAAAGGGGTCTCTAATTAAACTCCAATTCAAATTCCCACAACCCCACTTCATTTCCTGCACCTTCATTCCAAGGTACGTTTTGGGTGTTTCGGTTTCAACCTCTTGGGTTGATGAAATGATGCATCGGTTTTCATTGGTGATTCTTGTGCTGACAATATGTGGCGTGAGATGCAGAATGGCGAAAGCAGAAGAGAATGTGTACACTCTGGCTTCGGTGAGGGAGGATTTGATTAGACAAGAGGATACCATCATTTATGGTCTCATTGAGAGAGCCAAGTTTCCTTCCAATTCTCACACTTATGATGAGAAGTATGCTCAAATCCCTGGCTTTTCTGGCTCATTGGTGGAGTTTGTTGTTAAAAATACAGAGGACGTTCAAGCTAAGAGTAAATTGCAGGCTGGAAGATACACAAACCCTGAAGAAAACCCCTTCTTCCCTGAAAATTTACCACCAACAAGTGTGCCATCTTACCCCTTCTCGCAGTTTTTGCATCCTGGAGCTGCTTCAATTAACATAAACAAGTCCGTCTGGAAAATGTATTTGCAAGATTTACTTCCATTGCTTGCTACTTCGGGTGATGATGGCAACTATGCGCAAACTGCTGCTGCCGATCTTTCATTACTGCAGGCTATCTCAAGAAGGATTCACTATGGAAAGTTTGTGGCTGAGGTGAAATTCAGGGATGCTCCTCAAGACTATGAGCCTTTAATTCGAGCAAAGGATAGAGAAGGTTTGATGAAATTGTTGACATTTACGAGCGTTGAAGAGACAGTGAGGAAGAGGGTTGAAAAGAAGGCCACAGTGTTTGGTCAGGAAGTAAGTCTTGACAGTGATAATGATGGCAAAGGAAAAAGTAAGTTTGATCCAACAGTGGCTTCTCGTTTGTACAAAAATTGGGTGATACCTCTTACCAAAGAGGTTCAGGTTGAGTACCTCTTGCGCCGTGTAGACTGA 1146 0.4197 MWDPHVCLRLWQVPTRKEDGNTNTQLSSFQSTNVFSFLHYQFINPFHPLSSSLSFLCYIKYKPQKGSLIKLQFKFPQPHFISCTFIPRYVLGVSVSTSWVDEMMHRFSLVILVLTICGVRCRMAKAEENVYTLASVREDLIRQEDTIIYGLIERAKFPSNSHTYDEKYAQIPGFSGSLVEFVVKNTEDVQAKSKLQAGRYTNPEENPFFPENLPPTSVPSYPFSQFLHPGAASININKSVWKMYLQDLLPLLATSGDDGNYAQTAAADLSLLQAISRRIHYGKFVAEVKFRDAPQDYEPLIRAKDREGLMKLLTFTSVEETVRKRVEKKATVFGQEVSLDSDNDGKGKSKFDPTVASRLYKNWVIPLTKEVQVEYLLRRVD 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02749 381 SUPERFAMILY Chorismate mutase II 127 381 IPR036263 GO:0046417
Vimu1g02749 381 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 125 381 IPR037039 GO:0004106|GO:0009073
Vimu1g02749 381 PANTHER CHORISMATE MUTASE 124 381 IPR008238 GO:0004106|GO:0009073
Vimu1g02749 381 ProSiteProfiles Chorismate mutase domain profile. 124 381 IPR008238 GO:0004106|GO:0009073
Vimu1g02749 381 NCBIfam chorismate mutase 132 381 IPR008238 GO:0004106|GO:0009073
Vimu1g02749 381 FunFam Chorismate mutase 124 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02749 Vimu-Chr1 39717665 39720449 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02749 K01850 - gmx:100791341 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02749 1 39717665 39720449 Vimu1g02749 1 39717665 39720449 ECH