Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02725 ATGCGCCCTCGCAAGGCACTAGGGAAGACGATAACATCATCGAAGTCACGCCATCACTGCACTGTTGTCTTCGCCACCACGAGACCACCTCCTTTGCTCGAGCTAGATGATTTTCCACAAGCTGAGTTGTCCACTCGAGAACAGGATGTCATTTTTGATGAAACAAGGATGGCGATGCACCCTGAAAACTCTGGAAGTGAGAAGAAGATTCTCGTGGAGGTGGAGCATACTACTAATGGAGCTGGCACGCCCGGTGGGACTGAGGAAAACCAAACGGGTGAAGGGCAAGTTGAAAACGGTCGGACGATAGAGGAGAACCGATCGGATGAACTTCGAACAGACCTTGGTGATGACACAGATGGTATCTTCAATAATGGTTGCAACCAACAAGACATGCATGCTCTCTTAAACTTCAAGCAAGGAGTTACAGATCCCTCAGCTGTCCTTTCCTCATGGACCACTCAACTAGATTGTTGTCATTGGAAAGGAGTCATCTGTAGCAACATCACTAGTAGAGTCACTGGAATCTCTCTCCCATGTTCTACAACTCCTCCAATTTACAGGGACGAGGAAGATAAATCACATTGCCTTACAGGTTCCATTCGTCTCTCCTTGTTGTTAGTGGAGTTGGAATTTTTAGAATACTTGAATTTGAGAAACAATGACTTCTTAGCATTACAATTTGATTATCTGCATAATCATAATTGTCACAATCTATCTATACCTACTTCTTCTCATAGTCAGTGTGTCAACTCTTCAACTCTTCGTCATCTTGATTTAGCAGCTAACTGGAATCTTGTCATCAGTAGCCTTCAATGGCTTCCCTACATTTCCACCTTGGAATATCTTAATCTCTGCAGTGTTGATCTTAGCGAGGAAACTAATTGGCTTCCATTGGTGACTAAGCTTTCGTCACTTTCAGTCCTTAATATGTGTGATTCTAAGCTTAAAGATTTGAGTTTGTCTCTCCAGTATGCTAATTTTACTGCTCTCCAAGTTCTTGATCTTTCTGGCAATGAATTCAAGTCAGAGTTACCTAAGTGGCTATTCAATCTTAGTTCCACTGTCTATATTTTAGACCTTAGCTACAATTCTTTAATGGGACATCTACCTAAAGATTTGTTAAATCTTCGAGAACTGGAAGACCTGGTTATGTATAGCAATAACTTTGATGGACCCATTCCAGATTGGTTAGGTGATTTCAAACATTTAAAAGCTCTTATTCTTGCAGCAAACATGTTTTCTGGATCTATTCCTACAAATTTGGGAAATCTATCAACCTTGATTACCTTGGATGTTGGCTTTAATACATTGACAGGAGTTGTGTCTAAGAGAAATTTAGCCAAAATGTCAAAATTAAAGTCATTGTGTATATCTTCATATTCCACGTTAATCTTTGATTTTGACTCGGATTGGACTCCACCTTTTCAACTTGAGGAATTAGCACTTAAGTTTTCAAATCCCGACCTTCCTGCGTGGTTGTATACACAACGATCTATTGAAAGTTTAACTATATTCGAATCATCATTTGAGGCTCCACACAGATTTTGGAATTTTGTATCATCAGTGATTGAACTCATATTACAAGGCAACTCGATAGTTGCAAACATGTCAAATGTGTTGTTGAACTCTACCCTCGTTATTCTGGAATCGAATGGTTTGAAAGGTTGCTTGCCCCAGTTATCACCAAACGTGGTTATTGGCTCGTTACTAAATAATTTATTATCAGGAGAATTGTCTCCCCTCTTATGTGGTCATAATGTGTCGAATGGGAAAAACAATTTGTTGTTCTTGGACATATCATTGAATAATCTATCTGGAGGGCTTACAAATTGTTGGAAGAATTGGAAATCTTTGGTTGCTATTCACTTGGGAAACAATAATCTATCAGGAAAGATACCTCCATCATTAGGCTTCTTATCTAATCTCACCTCACTCCATTTGCATGAGAATAATCTACATGGTGAGATTCCTCTCTCATTGCATAATTGTCACTCTCTGTTGATTTTTAATGTTCGCAATAACCGATTATCAGGAAACATACCAGATTGGGTATCTCATGGTGTATTGGCTCTCCAATTAAGGTCCAATCATTTTAGTGGTAAAATCTCACCACAAATATGTGAAATGTCTTCCCTCATTGTGTTGGATATTGCACAAAACACAATCTCCGGTCATATACCCAGTTGTCTTGGTAATATCAAAACCCTACTTTTCAACAATGTCTCACGCCACAAACTTTCTTTTCAATTTCCTTCAGCAGTTCCTAATCGTAACATGAAGACTGACGACAGTCTAGAATTGGTTACTAAAGGGCAGGTATTACAATATGGAAAAAACTTACATTTTATGACCTTAATTGATATGTCAAGCAACAATTTGTCCGGAACAATACCTCCACAACTGTTTAGTCTCATTGGATTGCATTCCTTGAATTTATCCAACAACAAATTAGGAGGAGAAATACCTAATGAGATAGGAAATATGAAAAACTTGGAGTCCCTCGATTTTTCAACAAACCAACTTGGGGGAAAAATTCCTAAGAGCTTATCCAGATTGTCCTTTTTGGGTTACTTGAACTTGTCATTCAACAATTTGACAGGCAAAATACCATCAGGCACACAACTTCAAGGGTTTTCTGTACTTAGTTACATGGGCAATCATGATCTTTGTGGACCCCCACTTACCAAATCGTGCTTTCCGGATGATGAACATAACAACAGAGAGCTTGTGCATGAAGATGGAAATCAATTTAAATTTTTGACATGGTTTTACATCGGAATGGAATCTGGATTCGTGACAGGCTTTTTGGGAGTTTGTTGTATCTTTCATTCACAAAGAAGGGAAGGAGTCATGAAGCTTAGGAGAAGAGAAGATGATGGTGAAGTTCTTACAAGCAATGTCAGCAGTGATGAGCTTAATATTTAA 2928 0.3887 MRPRKALGKTITSSKSRHHCTVVFATTRPPPLLELDDFPQAELSTREQDVIFDETRMAMHPENSGSEKKILVEVEHTTNGAGTPGGTEENQTGEGQVENGRTIEENRSDELRTDLGDDTDGIFNNGCNQQDMHALLNFKQGVTDPSAVLSSWTTQLDCCHWKGVICSNITSRVTGISLPCSTTPPIYRDEEDKSHCLTGSIRLSLLLVELEFLEYLNLRNNDFLALQFDYLHNHNCHNLSIPTSSHSQCVNSSTLRHLDLAANWNLVISSLQWLPYISTLEYLNLCSVDLSEETNWLPLVTKLSSLSVLNMCDSKLKDLSLSLQYANFTALQVLDLSGNEFKSELPKWLFNLSSTVYILDLSYNSLMGHLPKDLLNLRELEDLVMYSNNFDGPIPDWLGDFKHLKALILAANMFSGSIPTNLGNLSTLITLDVGFNTLTGVVSKRNLAKMSKLKSLCISSYSTLIFDFDSDWTPPFQLEELALKFSNPDLPAWLYTQRSIESLTIFESSFEAPHRFWNFVSSVIELILQGNSIVANMSNVLLNSTLVILESNGLKGCLPQLSPNVVIGSLLNNLLSGELSPLLCGHNVSNGKNNLLFLDISLNNLSGGLTNCWKNWKSLVAIHLGNNNLSGKIPPSLGFLSNLTSLHLHENNLHGEIPLSLHNCHSLLIFNVRNNRLSGNIPDWVSHGVLALQLRSNHFSGKISPQICEMSSLIVLDIAQNTISGHIPSCLGNIKTLLFNNVSRHKLSFQFPSAVPNRNMKTDDSLELVTKGQVLQYGKNLHFMTLIDMSSNNLSGTIPPQLFSLIGLHSLNLSNNKLGGEIPNEIGNMKNLESLDFSTNQLGGKIPKSLSRLSFLGYLNLSFNNLTGKIPSGTQLQGFSVLSYMGNHDLCGPPLTKSCFPDDEHNNRELVHEDGNQFKFLTWFYIGMESGFVTGFLGVCCIFHSQRREGVMKLRRREDDGEVLTSNVSSDELNI 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02725 975 MobiDBLite consensus disorder prediction 77 113 - -
Vimu1g02725 975 Pfam Leucine rich repeat N-terminal domain 129 167 IPR013210 -
Vimu1g02725 975 FunFam Tyrosine-sulfated glycopeptide receptor 1 687 904 - -
Vimu1g02725 975 PANTHER LRR RECEPTOR-LIKE KINASE 127 947 - -
Vimu1g02725 975 SUPERFAMILY L domain-like 247 549 - -
Vimu1g02725 975 SUPERFAMILY L domain-like 546 896 - -
Vimu1g02725 975 Gene3D Ribonuclease Inhibitor 446 902 IPR032675 -
Vimu1g02725 975 Gene3D Ribonuclease Inhibitor 127 445 IPR032675 -
Vimu1g02725 975 SMART LRR_typ_2 805 828 IPR003591 -
Vimu1g02725 975 SMART LRR_typ_2 210 233 IPR003591 -
Vimu1g02725 975 SMART LRR_typ_2 328 352 IPR003591 -
Vimu1g02725 975 SMART LRR_typ_2 640 664 IPR003591 -
Vimu1g02725 975 SMART LRR_typ_2 829 857 IPR003591 -
Vimu1g02725 975 FunFam Leucine-rich repeat receptor protein kinase EMS1 321 419 - -
Vimu1g02725 975 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 588 681 - -
Vimu1g02725 975 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02725 Vimu-Chr1 39305467 39316876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02725 127 939 Miscellaneous Gene Families AT1G74190 27.497 3.72e-67 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02725 - - vum:124822649 1137.87