Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02723 ATGAGTAAATTTCTCTCTCAAAATGCAATCATTTTTGTATGGTTGCTATGCGGAATCATGTTCAACACTGCCTTTTGCAGTTCCAATATTCGTTGCAACCAACAAGACATGGATGGTCTCTTAAACTTCAAGCAAGGAGTTACAGATCCCTCAGCTGTCCTTTCCTCATGGACCTCTGAACTAGATTGTTGCCATTGGAAAGGAGTGATGTGTAGCAACATCACAAGTAGAGTCACTGGAATCACTCTCCCATGTTCTACAACTCTTCCAATTTACAGGGACGAAGAAGATAAATCACATTGCCTTACAGGTTCAATTCACCTCTCCTTGTTGTTAGTGGAGTTGGAATTTTTAGATTACCTGGATTTCACAAATAATGACTTTTTAGCATTACAATTTGATTATCTGCATACTCATAATTGTCATAGTCTATCTATACCTACTCCTCGTTTGTGTGTCAACTCTTCAACCCTTCGTCATCTTGATTTATCACTTAACTGGAATCTTATTATCAATAGCCTTCAATGGCTTCCCTACATTTCCTCACTGGAATATCTTAATCTCCGTGACATTGATCTTAGCATGGAAAGTAATTGGCTTCAATTAGTGACTATGCTTCCATCACTTTCATTCCTCAATATGCGTGCTTGTGGACTTAAAGACTTGAGTTTGTCTCTCCAGTATACTAATTTCACTAAACTCGAATTTCTTAGTCTTTCTGCAAATGAATTTAACTCAGAGTTGCCAAAGTGGTTATTCAATCTTAGTTCTGGTATTTATCATTTAGACCTTAGCTCAAGTTCTCTAATAGGACATCTACCTAAGAACTTGTTAAATCTTAGAGAATTGGAATACTTGAACATGGAAGACAATAACTTTGATGGACCCATTCCAGATTGGTTAGGTCATTTCAAACATTTAAAAAGTCTTATTCTTGGAGTAAACGATTTTTCAGGATCTATTCCCACAAATTTGGGAAATCTATCAACCTTGATTGACTTGGATGTTGCCTCAAATCCATTGACAGGAGTTGTCTCTGAGAGAAATTTAGCCAAATTGTCAAAATTAAAGTTATTGGCTATATACTCACATTCCAAATTAATCTTTGATTTTGACTCGGATTGGGTTCCACCTTTTCAACTTGAGGAATTAGTACTCGGGTTTTCAAATCCCAACCTTCCTACGTGGTTATATACACAGCGATCACTTGAAACATTAACTATATGGGAATCATCATTTGAGGCTCCAGACAAATTTTGGAATTTGGTATCATCAGTCATTGAACTCGAATTACAAGACAATTTGATAGATGCGAACATGTCAAATGTATTGTTGAACTCTACCGTCACTGTTCTGTCATTGAATGGTCTAAAGGGTTGCTTGCCTCAATTATCACAACAGGTGACAATTGTCTCGTTATCAAATAATTCATTATCAGGAGAATTGTCTCCCCTCTTATGTGGTCATAATGTGTCCAATGGGAAAAAGAATTTGTTGTTCTTAGACATATCATTGAATAATCTATCTGGAGGACTTACAAATTGTTGGAAGAATTGGAAATCTTTGGTTGCTATTCACTTGGGAAGCAATAATCTATCAGGAAAGATACCTTCATCACTAGGCTTCTTATCTAATCTCACCTCACTCCATTTGCATGAGAATAAACTACATGGTGACATTCCTCTCTCATTGCAAAATTGTCGATCTCTATTGGTCTTTAACGTTCGCAATAACCAATTATCAGGAAACATACCATATTGGATATCTTATGGTGTATTGGCTCTCCAATTAAGGTCCAATCATTTTAGTGGTAAAATATCACCACAAATATGTGAAATGTCTTCTCTTATTGTGTTGGATATTGCACAAAACACAATCTCCGGTGATATACCCAGTTGTCTTGGAAATATCAAAACCCTACTTTTCAACAATATTTCACGCCACAAACTTTCCTTTGAATTTCCTTCATTTGGTGATCGTTACTTAATCAATGACGACAATCTTGAATTGGTTACTAAAGGTCAAGTATTAGAATATGATCGTAACCTACACTTTATGACCTTAATTGATATGTCAAGTAACAATTTGTCCGGAACAATACCTCTACAGATGTATAGTCTCATTGGATTGCATTCCTTGAATTTATCCAACAACAAATTATCAGGAAAAATACCAAATGAGATAGGAAACATGAAAAACTTAGAGTCCCTCGATTTTTCAACAAACCAACTTTGCGGAGAAATTCCTGAGAGCTTATCCAGATTGTCCTTTTTGGGTTACTTGAACTTGTCATTCAACAATTTGACAGGCAAAATACCATCAGGCACACAACTTCAAAGTTTCTCCGCACTTAGTTACATGGGCAATCATGATCTTTGTGGACTTCCACTGATCAAAACGTGCTTTCCGAATGATAAACATAAAGACAGAGAGGTTGTGCATGAAGGTGGAAATCAATTTAATTTTTTGACATGGTTTTACATCGGAATGGAATCTGGATTTGTGACAGGCTTTTTGGGAGTTTGTTGTACTATTTTCTTAAACAGAAAATTGAGACATGCCTCCTTTAAGTTTCTTTATGACTTGAAAGATCGAATTCATATTATGGTGGTGACAAACATTAATCGCTTCAGTTAA 2637 0.3591 MSKFLSQNAIIFVWLLCGIMFNTAFCSSNIRCNQQDMDGLLNFKQGVTDPSAVLSSWTSELDCCHWKGVMCSNITSRVTGITLPCSTTLPIYRDEEDKSHCLTGSIHLSLLLVELEFLDYLDFTNNDFLALQFDYLHTHNCHSLSIPTPRLCVNSSTLRHLDLSLNWNLIINSLQWLPYISSLEYLNLRDIDLSMESNWLQLVTMLPSLSFLNMRACGLKDLSLSLQYTNFTKLEFLSLSANEFNSELPKWLFNLSSGIYHLDLSSSSLIGHLPKNLLNLRELEYLNMEDNNFDGPIPDWLGHFKHLKSLILGVNDFSGSIPTNLGNLSTLIDLDVASNPLTGVVSERNLAKLSKLKLLAIYSHSKLIFDFDSDWVPPFQLEELVLGFSNPNLPTWLYTQRSLETLTIWESSFEAPDKFWNLVSSVIELELQDNLIDANMSNVLLNSTVTVLSLNGLKGCLPQLSQQVTIVSLSNNSLSGELSPLLCGHNVSNGKKNLLFLDISLNNLSGGLTNCWKNWKSLVAIHLGSNNLSGKIPSSLGFLSNLTSLHLHENKLHGDIPLSLQNCRSLLVFNVRNNQLSGNIPYWISYGVLALQLRSNHFSGKISPQICEMSSLIVLDIAQNTISGDIPSCLGNIKTLLFNNISRHKLSFEFPSFGDRYLINDDNLELVTKGQVLEYDRNLHFMTLIDMSSNNLSGTIPLQMYSLIGLHSLNLSNNKLSGKIPNEIGNMKNLESLDFSTNQLCGEIPESLSRLSFLGYLNLSFNNLTGKIPSGTQLQSFSALSYMGNHDLCGLPLIKTCFPNDKHKDREVVHEGGNQFNFLTWFYIGMESGFVTGFLGVCCTIFLNRKLRHASFKFLYDLKDRIHIMVVTNINRFS 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02723 878 Gene3D Ribonuclease Inhibitor 350 804 IPR032675 -
Vimu1g02723 878 SUPERFAMILY L domain-like 205 456 - -
Vimu1g02723 878 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 225 320 - -
Vimu1g02723 878 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Vimu1g02723 878 PANTHER LRR RECEPTOR-LIKE KINASE 32 225 - -
Vimu1g02723 878 SUPERFAMILY RNI-like 99 256 - -
Vimu1g02723 878 Gene3D Ribonuclease Inhibitor 32 348 IPR032675 -
Vimu1g02723 878 SUPERFAMILY L domain-like 448 798 - -
Vimu1g02723 878 FunFam Tyrosine-sulfated glycopeptide receptor 1 563 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02723 Vimu-Chr1 39282974 39286519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02723 234 814 Receptor kinase-like Gene Family AT2G33060 31.756 4.87e-68 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02723 - - vum:124822649 1198.34