Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02693 ATGGCGGCCTCCGTCGCACACGGCGGCACTCTCACTGCGCACGATCGCCAGATTCTGACGGCGGTGAACGCCGGAGCGTCGAGCCTGTCGTTGGCCGGTTCCAGCTTCATTGTACTCTGCTACCTTCTCTTCAAGGAGCTTCGCAAGTTCTCCTTCAAGCTTGTTTTCTACCTCGCTCTCGCTGATATGCTTTGCAGTTTCTTCAGCATAATAGGGGACCCGTTCAAAGGTTTATTTTGTTATGCTCAGGGCTATAGCACACATTTCTTTTGTGTGGCATCTTTTCTATGGACTACAACAATTGCTTTTACCCTGCACCGCACTGTTGTAAAACACAAAACTGATGTTGAAGATTTAGAGGCCATGTTTCACTTGTATGTCTGGGGTACTTCCTTGGTTATGACTGTTATGCGCTCTATCGGTAATGACCATAGACATTTAGGAAGTGGTACAAAATACAGTCCCTTTAAAAGTCAAGCATCAGGTGTGCAACCGCTTAGAGCACATCAAGGATTTAAAGAAAAATTAAGAACAGTATGGTCATCTTGGGTTCGTGGCATAATTAATGACCAGTCTGTAGCTCTAATATGTTCTGCTGCACTGTTTGAGGAGCTGACCACTGGATGGGATGCGGGTATTGAAGTTTTGAATCAAGCTTTTTCAATGGCGGTTCATTTTGTAACATTTTACATGCCACTCTGGGGTGCAATTCTGTATAATGGGTTCACATACTTTCAAGTAATACGCATGCTGAATAATGCAACCCGTATGGCGGTTGGTATGTCAAGCCAAACTTTCGTGTCAGATACAAGAGATAACATGAGGGCCCTGAATCGCTGGGGATACTATCCACTAATTCTGATTGGATCATGGGCTTTTGGAACTGTTAACCGTATTCATGATTTTTTTGAACCCAACCATAAAATCTTTTGGCTCACATTTCTTGATGTTGGAACAGCTGCTCTTATGGGCCTCTTTAACTCAATTGCTTATGGTCTCAACTCTTCTGTACGCCGGGCAATTTGTGAAAGACTGGACAAGTTCTGGCCTGAGAGATTATCCAGATGGCTCCCTAACAATTTGAAGTACAAGAATCTACAGCAAGAAAGTGAACTAGTTTTGTTCAAAACGGAAGAAGATCAATAA 1146 0.4354 MAASVAHGGTLTAHDRQILTAVNAGASSLSLAGSSFIVLCYLLFKELRKFSFKLVFYLALADMLCSFFSIIGDPFKGLFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAMFHLYVWGTSLVMTVMRSIGNDHRHLGSGTKYSPFKSQASGVQPLRAHQGFKEKLRTVWSSWVRGIINDQSVALICSAALFEELTTGWDAGIEVLNQAFSMAVHFVTFYMPLWGAILYNGFTYFQVIRMLNNATRMAVGMSSQTFVSDTRDNMRALNRWGYYPLILIGSWAFGTVNRIHDFFEPNHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKFWPERLSRWLPNNLKYKNLQQESELVLFKTEEDQ 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02693 381 PRINTS Putative plant GPCR, GCR1, signature 52 74 IPR022340 -
Vimu1g02693 381 PRINTS Putative plant GPCR, GCR1, signature 36 50 IPR022340 -
Vimu1g02693 381 PRINTS Putative plant GPCR, GCR1, signature 120 135 IPR022340 -
Vimu1g02693 381 PRINTS Putative plant GPCR, GCR1, signature 82 95 IPR022340 -
Vimu1g02693 381 PRINTS Putative plant GPCR, GCR1, signature 19 34 IPR022340 -
Vimu1g02693 381 PRINTS Putative plant GPCR, GCR1, signature 97 115 IPR022340 -
Vimu1g02693 381 SUPERFAMILY Family A G protein-coupled receptor-like 15 352 - -
Vimu1g02693 381 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 10 339 - -
Vimu1g02693 381 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 19 335 IPR017981 GO:0004888|GO:0007166|GO:0016020
Vimu1g02693 381 Gene3D - 11 356 - -
Vimu1g02693 381 PRINTS GCR1-cAMP receptor family signature 30 48 IPR022343 -
Vimu1g02693 381 PRINTS GCR1-cAMP receptor family signature 80 98 IPR022343 -
Vimu1g02693 381 PRINTS GCR1-cAMP receptor family signature 49 64 IPR022343 -
Vimu1g02693 381 Pfam Slime mold cyclic AMP receptor 21 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02693 Vimu-Chr1 38860191 38871622 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02693 K22987 - sspl:121805188 445.277