Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02683 GATTTAATCATTGCTGTGAAAGGTGTGATAATGCAGGAGGAGGGGAATCAGGAAGAGCCATATGGTGAATCTGTGGAGGAATATAAACCCAAAAGGGGGTTTTGGGACTGTTTTTACATCCCCATCCAATGGTTTAGCATGCTTTCTAGGGAAATGCATTGGAGCTTTGTATTTGGGGTGGTGGTTATTTATGGAATAAGCCAGGGACTTGGTGTAGCTCTTGCTGAAGTTGGCACAAAGTATTACATGAAAGATGTTCAGAAGGTGCAGCCATCGGAGGCACAGATTTATAAAGGAATCACATCCATTCCTTGGGTTGTGAAACCTATTTGGGGTCTTCTCACTGATGTTCTCCCATTTTTTGGGTATCGCAGGAGACCTTATTTCATTTTTGCTGGTATCATAGGAGTAGTTTCCATGCTTTTGTTATCTTTGCATGAAAACATGCATCTTGTGTTGGCCCTTCTGTCATTAACGGCTGGAAGTGCTGGGGTGGCAATAGCAGATGTAACCATTGATGCTTGTGTGGCACAGAACAGTATCTCTCATCCTTCACTTGCAGCTGATATGCAAAGTTTATGTGCCGCCAGTTCTTCCATTGGATCACTATTTGGTTTCTTCATCAGTGGAGTCTTTGTTCACCTTATAGGCCCAATGGGGGTGTTTGGTTTGATGACCATCCCAGCTGGACTAGTAGTTTCTGTTGGTTTTCTGCTTTATGAGCCTCGCATGCACCACACATCATATAGACAGGTGAAACAAAATTTTGTTGATGCTTCCAAGGCCATGTGGACTACATTGAAGAGTGAAGATGTATGGAGGCCTTGTTTATACATGTATTTATCCATTACACTGAGTTTGGAAGTTCGTGAAGGAATGTTTTATTGGTATACAGAATCAAAGGGTGGACCATCTTTCTCGCAGGAGAGTGTTGGTTTTATATTTTCAATTAGTTCAGTGGGGTCACTTTTAGGTGCAATCCTATATCAGTATGCTCTGAAGGAATATGCATTCAGGAACTTGCTGTTCTGGACTCAGTTGATATATGGTTTGTCAGGGATGCTTGATCTGGTTCTGGTATTGAGATGGAACCTGAAGTTTGGCATAGCAGATTATGTGTTTGTTGTGATTGTTGAAAGCATAGCCCAAATGACCAACAGGCTAAAGTGGATGCCTATGCTTGTGCTTAGCTCAAAGCTGTGTCCCTCAGGCATTGAAGGAACCTTTTTTGCTCTCTTGATGTCAATTGATAATGTTGGACTTCTCTCTGCAGCATGGGGTGGTGGTTTTGTTCTCCACATTCTGAGGATCACAAGAACAAGGTTTGATAATATTTGGTTGGCTATTTTGATCAGGAACATCTTAAGGATCACTCCACTTTGGCTGCTGTTTTTGGTTCCTAGAACTGAACCCAACTCTTCCATTCTCCCAACAACTGAAACAATTGATTCCGAGGTGGTCATTGAGACCTCAGACTCCAAAAATGTTGAATTGGTCTCCCTTGTACACAGTGTTGATGCTAAATAG 1527 0.4217 DLIIAVKGVIMQEEGNQEEPYGESVEEYKPKRGFWDCFYIPIQWFSMLSREMHWSFVFGVVVIYGISQGLGVALAEVGTKYYMKDVQKVQPSEAQIYKGITSIPWVVKPIWGLLTDVLPFFGYRRRPYFIFAGIIGVVSMLLLSLHENMHLVLALLSLTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCAASSSIGSLFGFFISGVFVHLIGPMGVFGLMTIPAGLVVSVGFLLYEPRMHHTSYRQVKQNFVDASKAMWTTLKSEDVWRPCLYMYLSITLSLEVREGMFYWYTESKGGPSFSQESVGFIFSISSVGSLLGAILYQYALKEYAFRNLLFWTQLIYGLSGMLDLVLVLRWNLKFGIADYVFVVIVESIAQMTNRLKWMPMLVLSSKLCPSGIEGTFFALLMSIDNVGLLSAAWGGGFVLHILRITRTRFDNIWLAILIRNILRITPLWLLFLVPRTEPNSSILPTTETIDSEVVIETSDSKNVELVSLVHSVDAK 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02683 508 Gene3D MFS general substrate transporter like domains 48 452 IPR036259 -
Vimu1g02683 508 Pfam BT1 family 277 471 IPR039309 -
Vimu1g02683 508 Pfam BT1 family 68 241 IPR039309 -
Vimu1g02683 508 SUPERFAMILY MFS general substrate transporter 56 469 IPR036259 -
Vimu1g02683 508 CDD MFS_FBT 59 464 - -
Vimu1g02683 508 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 42 474 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02683 Vimu-Chr1 38756921 38759902 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02683 - - ccaj:109816000 875.93