Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02678 ATGATGATGTCAGGTACATGTTCTTTGAGAGATCTCTCGATCAGGCAAAATGTAACTGGAGTTAAAGTACGAGGAAAGCCAGAATGGAGAGTGAAAATCACCAACAATTGTGCATGTGTTCAATTGAACGTGATGTTGAATTGCGAGGGATTTCGAACGGTTGAGAAAATAGACCCAACAGTTTTGAGAATCTCCCCTGCTGGCTGTCTTCTTAACAATGGTCAATCTGTCTATGGAGATCCTGTCCAATTTAATTATGCTTGGGACAACCAATTTGAATTCACTCCTCTTTCCTCTCAGATTGCATGTAGGCACTATTCGTGCCCGACCCGACCCGTTGGCATCCCTAGGTGGACTGAGGGTGGTGGACCATGGGCTGTGCTTTTGGAACTTGGTCACAAGCTTACAATTCCTGTCTCAACTCTTCATAACCCGGGCCAACACTGCTAG 450 0.4533 MMMSGTCSLRDLSIRQNVTGVKVRGKPEWRVKITNNCACVQLNVMLNCEGFRTVEKIDPTVLRISPAGCLLNNGQSVYGDPVQFNYAWDNQFEFTPLSSQIACRHYSCPTRPVGIPRWTEGGGPWAVLLELGHKLTIPVSTLHNPGQHC 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02678 149 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 7 101 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02678 Vimu-Chr1 38722140 38723996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02678 5 103 Glycosyltransferase AT4G32110 38.614 1.76e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02678 - - qsa:O6P43_013179 124.79