Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02657 ATGAGGAGGGTGAGTGTTGGAGGTCATGGCCAATGGTCAAAGGTGAAAGGTGGGTCTGACGGAAGTGAGAAAATTGGGAGAATGGGTTCTTCTCTGTTTTGCTTTGGTTTCGGTGTTTCTGTGATGGAGGAGATAGTGATTGAGTTGATGGATCTGTTGGAGGTGATCAATTGGATTTGGATGAGAAAAATGGAGGAGAGGAGAATCACATGTGTGAACTATGTTGGCCCTGGAGGTGTCGAAGGTTGGAGGGGAGTGATGGAGAGGAAAGAATTGTGTCTCTATGTGATCATTGAAGAATTGAGATTCAAGGCTCAAAATCTGGTTGAGGTAGTTCCTGGTTCCCTGAATGACGAAAGTGTTGAGGTAGTTAGGGTTATGGCTTCTTCTGTTCTCTCCACAGCTTCGCATTCTCTCTCTGCCTCTTCTTCTCTCTCCTCGCGCCAAATCCACAAGGGGAAACCCAAGGTTGGAGACAACGCTTTGAGATTTAACAATGGAATCAACTCCTTCCCAAATGCAAGGTCTAGTGGTCGGGTCTCTATGACTGTTGCACTTAATGTTTCTCGATTTGAGGGCATACCTATGGCTCCTCCTGACCCAATTCTTGGAGTTTCTGAGGCCTTTAAAGCGGACACAAGTGATGTAAAGCTCAATCTTGGAGTAGGGGCGTACAGAACAGAAGAACTACAGCCATATGTGCTTAATGTTGTTAAGAAGGCAGAGAATCTTATGCTGGAGAGGGGGGATAACAAAGAGTATCTCCCTATTGAGGGTTTGGCTGCCTTTAACAAGGCAACGGCAGAGTTGTTACTTGGAGCAGACAACCCAGCAATCAAACAGCAAAGAGTTGCCACTGTCCAAGGTCTTTCTGGAACTGGTTCTCTGAGGCTAGGTGCAGCTCTGATTGAAAGATATTTTGCTGGGTCTAAAGTTTTGATATCAGCTCCTACCTGGGGTAATCACAAGAATATTTTCAATGATGCTGGAGTGCCGTGGTCTGAGTACCGATATTATGACCCCAAGACTGTTGGCTTGGATTTTGAGGGCATGATTGAAGATATAAAGTCAGCTCCTGAAGGATCTTTTGTGGTACTACATGGATGTGCCCATAACCCAACTGGTATTGATCCAACCCTTGAACAATGGGAAAAAATAGCTGATGTAATTCAAGAAAAGAACCACATTCCCTTTTTTGATGTTGCTTACCAGGGCTTTGCCAGTGGAAGCCTTGATGAAGATGCAGCTTCTGTGAGACTGTTTGTTGCTCGTGGTATGGAGGTTCTTGTGGCTCAGTCATACAGTAAAAATCTTGGTCTTTATGCTGAAAGGATTGGAGCAATCAATGTGATTTCGTCATCTCCAGAATCTGCAACTAGGGTAAAGAGCCAGTTGAAAAGGCTAGCTCGACCTATGTACTCTAATCCACCTGTACACGGGGCTCGAATTGTTGCCGATGTTGTTGGAAATCCAGTTCTCTTTAATGAATGGAAAGCAGAAATGGAAATGATGGCAGGAAGAATCAAGAATGTTAGACAACAGCTATACAATAGTATTACTTCTAAAGACAACAGTGGAAAAGATTGGTCATTTATACTTAAGCAGATAGGCATGTTCTCATTCACCGGCTTGAACAAAGAACAGAGTGACAACATGACAAATAAGTGGCATGTATACATGACAAAGGATGGAAGGATTTCCCTGGCAGGATTGTCGTTGGCTAAATGTGAATACCTTGCAGATGCTATTATAGACTCGTATCATAATGTCAGCTGA 1776 0.4375 MRRVSVGGHGQWSKVKGGSDGSEKIGRMGSSLFCFGFGVSVMEEIVIELMDLLEVINWIWMRKMEERRITCVNYVGPGGVEGWRGVMERKELCLYVIIEELRFKAQNLVEVVPGSLNDESVEVVRVMASSVLSTASHSLSASSSLSSRQIHKGKPKVGDNALRFNNGINSFPNARSSGRVSMTVALNVSRFEGIPMAPPDPILGVSEAFKADTSDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFAGSKVLISAPTWGNHKNIFNDAGVPWSEYRYYDPKTVGLDFEGMIEDIKSAPEGSFVVLHGCAHNPTGIDPTLEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGMEVLVAQSYSKNLGLYAERIGAINVISSSPESATRVKSQLKRLARPMYSNPPVHGARIVADVVGNPVLFNEWKAEMEMMAGRIKNVRQQLYNSITSKDNSGKDWSFILKQIGMFSFTGLNKEQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02657 591 CDD AAT_like 218 583 - -
Vimu1g02657 591 Gene3D Aspartate Aminotransferase, domain 1 194 583 IPR015422 GO:0003824
Vimu1g02657 591 Pfam Aminotransferase class I and II 217 583 IPR004839 GO:0009058|GO:0030170
Vimu1g02657 591 MobiDBLite consensus disorder prediction 1 22 - -
Vimu1g02657 591 SUPERFAMILY PLP-dependent transferases 189 585 IPR015424 -
Vimu1g02657 591 FunFam Aspartate aminotransferase 477 583 - -
Vimu1g02657 591 Gene3D - 249 490 IPR015421 GO:0003824
Vimu1g02657 591 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 433 446 IPR004838 GO:0003824|GO:0009058|GO:0030170
Vimu1g02657 591 FunFam Aspartate aminotransferase 249 490 - -
Vimu1g02657 591 PRINTS Aspartate aminotransferase signature 395 407 IPR000796 GO:0006520|GO:0008483
Vimu1g02657 591 PRINTS Aspartate aminotransferase signature 463 488 IPR000796 GO:0006520|GO:0008483
Vimu1g02657 591 PRINTS Aspartate aminotransferase signature 364 383 IPR000796 GO:0006520|GO:0008483
Vimu1g02657 591 PRINTS Aspartate aminotransferase signature 532 550 IPR000796 GO:0006520|GO:0008483
Vimu1g02657 591 PANTHER ASPARTATE AMINOTRANSFERASE 185 589 IPR000796 GO:0006520|GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02657 Vimu-Chr1 38377886 38391534 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02657 K00811 - gmx:547792 833.558