LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu1g02647	TCGATTTGTTTGCCCTTCAATTCAATGAGAAACAGTTTGGACAACATGCGGAGAGAGACAACATTGTTGGTGGTACTGCTACTTCTAGTGCATAAAAGTCATGCTCGTTGTCACCCTTCTTCCTGTGGAAAAATAACCCACATCAGCTATCCATTTCGATTACAAGGCGACCCAGAATACTGTGGTGACCAAAGGTATGAGCTTGGTTGTGAGAATAATGTTACGGTGTTGTATCTGAACTCTGCACAATTCCATGTTCAGGCAATCAACTACGACAACTACACCGTGAGAGTGGTTGACCCAGCACTTCAACACCACAACTGCTCCTCCCTTCCTCTCCGTTCCCTCTCTCGCTCCAATTTCTCTGATACTTATACGAATCGCATGGGTCCATACCAAGCCGGTCTAGATCCGGATCGTAATTGGGAATCTCTGAGTTTCGAGCATATAGTGTTTCTGAACTGTAAGCATTCAGTGAGAGAGAACAGCAAGTACGTGGAGAGTGGTGAGTGCGTGAAGTGGGACTCGAAGGGCTATGCATATGCAGTTAGTGGTGACCTAAAAGCTGAGGACATAGAAGTTGGGTGTGACGTGAAGCTTGTCGCTCCCACATCGTTGAGGACTATGAATAACCATTCCTACGCTGCCATTCACAGGACTCTCGCCTTTGGATTTGAGATTTCGTGGACAAAACTCGCCTGTCAGAATCTTTGTCGACTCAACCGGTTCTGCTATTTCGACTCTTCTAAGCAGAAGCTTCGATGCGGGACTGGTATTTTGGATATTCTGCTGGCAGGTACGAATCCTTATCATTTTAATTTACCTAAGCTTCAATTATAA	840	0.4536	SICLPFNSMRNSLDNMRRETTLLVVLLLLVHKSHARCHPSSCGKITHISYPFRLQGDPEYCGDQRYELGCENNVTVLYLNSAQFHVQAINYDNYTVRVVDPALQHHNCSSLPLRSLSRSNFSDTYTNRMGPYQAGLDPDRNWESLSFEHIVFLNCKHSVRENSKYVESGECVKWDSKGYAYAVSGDLKAEDIEVGCDVKLVAPTSLRTMNNHSYAAIHRTLAFGFEISWTKLACQNLCRLNRFCYFDSSKQKLRCGTGILDILLAGTNPYHFNLPKLQL	279

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu1g02647	279	PANTHER	OS01G0690200 PROTEIN	22	255	-	-
	Vimu1g02647	279	Pfam	Wall-associated receptor kinase galacturonan-binding	37	100	IPR025287	GO:0030247

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu1g02647	Vimu-Chr1	38242166	38243938	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu1g02647	27	265	Receptor kinase-like Gene Family	AT5G38260	24.324	1.89e-09	56.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu1g02647	-		-	vra:106763727	387.882