LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu1g02641	ATGATGAGGAGAGAGAGAACATTGTCGGTGGTACTGCTACTTATTCTACTCCACCATGTTTCTGCTACCAAGGACCACCAACAACACCGTTGTCCACCTTCTTCTTGTGGCAACATCCCCAACATCACTTATCCATTTCGATTACAAGGCGACCCAGATAATTGTGGTGACGAAAGGTACGAGCTTGGTTGTCAGAATAATGTTACTGTGTTGTATCTGAACTCTATACAATACCATGTTCAAGCAATAAACTATGACAACTACACCGTGAGAGTTGTTGACCCTGAACTTCAACACCACAACTGCTACTCCCTTCCTCTTCGTTCTCTCTCTCGCTCCAATTTCTCTGATACTTACACTGACTCCGCCGATCTATACCAAGCCACTCTATATCTGTATCTAATTATGGAAAATCTGAGTTTCGAGCATATAGTGTTTGTGAACTGTAACCATTCGGTGAGAGAGAACGGGAAGTATGTGGAAAGCGGTGAGTGCGTGAAGTGGGACTCAAAAGGCTATGCATATGCTGTGGTTGGTGACCTAAAAGCTAAGGACTTAGAAGTTGGGTGTGACGTGAAGCTTGTTGCTCCCACATCCTTCAGAACTTTCAATAAGCATTCATACGCTGCCATTCACACGGCTCTCGCCTATGGATTTGAGATCTCTTGGATAAACCTCGCCTGTCAGAATCATTGTCTTAAAGAAGATTGCTATTTCGACCCTTCTAGCCAGATCTTTGATTGCTTTGACTTTTCTCACTCCGCTTTGCTTAGTCTTCTCTTGACTCAGTCCAATTTGGCACCGCAAGCCTTTAAGAGAGAAACCGGTCTGGGAAAGCGGTTGCCCATCAGCGGGGAGGACGGAGAGGAGGTGGGAGAGTGGCTCGTATAG	891	0.4545	MMRRERTLSVVLLLILLHHVSATKDHQQHRCPPSSCGNIPNITYPFRLQGDPDNCGDERYELGCQNNVTVLYLNSIQYHVQAINYDNYTVRVVDPELQHHNCYSLPLRSLSRSNFSDTYTDSADLYQATLYLYLIMENLSFEHIVFVNCNHSVRENGKYVESGECVKWDSKGYAYAVVGDLKAKDLEVGCDVKLVAPTSFRTFNKHSYAAIHTALAYGFEISWINLACQNHCLKEDCYFDPSSQIFDCFDFSHSALLSLLLTQSNLAPQAFKRETGLGKRLPISGEDGEEVGEWLV	296

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu1g02641	296	PANTHER	OS01G0690200 PROTEIN	9	251	-	-
	Vimu1g02641	296	Pfam	Wall-associated receptor kinase galacturonan-binding	31	94	IPR025287	GO:0030247

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu1g02641	Vimu-Chr1	38185709	38187906	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu1g02641	9	249	Receptor kinase-like Gene Family	AT5G38260	22.449	2.62e-10	59.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu1g02641	-		-	vra:106763727	446.047