LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu1g02639	ATGATGAGGAGAGAGAGAACATTGTTGGAGGTACTGCTACTTATTCTACTCCACCACCATGTTTCTGCTACCAAGGACCACCAAGAACACCGTTGTCCACCTTCTTCTTGTGGCAACATCCCCAACATCACTTATCCATTTCGATTACAAGGTGACCCAGAGAATTGTGGTGACGAAAGGTACGAGCTTGGTTGTGAGAATAATGTTACGGTGTTGTATCTGAACTCTATACAATACCATGTTCAAGCAATCAATTACGAGAACTACACAGTGAGAGTGGTTGATCCTGCACTTCAACACCACAACTGCTCCTCCCTTCCTCTTCGTTCTCTCTCTCGCTCCAATTTCTCTGATACTTACACTGACTCCGCCGATCTATACCAAGCCACTCTATATCTGTATCTAATTGTGGAAAATCTGAGTTTCGAGCATATAGTGTTTGTGAACTGTAACCATTCGGTGAGAGAGAACGGGAAGTATGTGGAAAGCGGTGAGTGCGTGAAGTGGGACTCAAAAGGCTATGCATATGCTGTGGTTGGTGACCTAAAAGCTAAGGACTTAGAAGTTGGGTGTGACGTGAAGCTTGTTGCTCCCACATCCTTCAGAACTTTCAATAAGCATTCATACGCTGCCATTCACACGGCTCTCGCCTATGGATTTGAGATCTCTTGGTTAAACCTCGCCTGTCAGAATCATTGTCGTAAAGAATATTGCTATTTCAACTCTTCTAGCCAGATCTTTGATTGCGTAGGAGGGTTACCTTTAGAGTTGTTAGCTGGGTTTTACAGTAGTGTGAGAGGATTCAACAAGGTAGAATTGTTTGATGAAAACAGAAACCTGATCTTGAGAAGCAAGATCTCAAAGAATCGCACATTTCATATCAGCATGGAGACAGTGAAGGATGTCAAGTCTATGAATGTTGTGAAAGAAGAATATTGGCTATGGCATTGGAGGTATGGCCACCTACATTGA	972	0.4321	MMRRERTLLEVLLLILLHHHVSATKDHQEHRCPPSSCGNIPNITYPFRLQGDPENCGDERYELGCENNVTVLYLNSIQYHVQAINYENYTVRVVDPALQHHNCSSLPLRSLSRSNFSDTYTDSADLYQATLYLYLIVENLSFEHIVFVNCNHSVRENGKYVESGECVKWDSKGYAYAVVGDLKAKDLEVGCDVKLVAPTSFRTFNKHSYAAIHTALAYGFEISWLNLACQNHCRKEYCYFNSSSQIFDCVGGLPLELLAGFYSSVRGFNKVELFDENRNLILRSKISKNRTFHISMETVKDVKSMNVVKEEYWLWHWRYGHLH	323

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu1g02639	323	Pfam	Wall-associated receptor kinase galacturonan-binding	32	95	IPR025287	GO:0030247
	Vimu1g02639	323	PANTHER	OS01G0690200 PROTEIN	11	250	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu1g02639	Vimu-Chr1	38167999	38172883	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu1g02639	11	249	Receptor kinase-like Gene Family	AT5G38260	23.967	6.15e-11	61.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu1g02639	-		-	vra:106763727	435.261