Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02619 ATGAACAACACCGTTTGTTCGCCTTACTTTGATCCTGACTTTGATACTCTCCCAGAAAGATTATATGGTCCACCTTGCCGAGTCTGCATCGACAATGACAGCATGAAGGGATGCACAGTGGTCAAGGTAGATAGTGTTAACAAGGAGGGTCTTCTCCTAGAAGTGGTGCAAGTTTTGACAGACATGAACCTTCAAATCTGCAAAAGCTATATTTCATGTGATGCTGGTTGGTTCATGGATGTGTTTCATGTTAGAGACGAGAATGGCAACAAACTAACGGATCAGAAAGCCATTAACGAAATCCAACAGGCCCTAGGAAAATCAAGAGCCTCTCCACCATCACAACAATACAGCAACGTAAATTCAGTCATCACAACAATGACTAACTACAAGACATATTCCAAGAAATTCATCCCTTTACTCTCTAACTCAACTGACCAGTACACAGCTATTGAAATGACCGGCACGGACCGTCCCGGATTATTTTCCGAGATCTCGGCTGCGTTAGTGGATCTCCGATGTAACATAGTTGAAGTTCACGCATGGAGTCATAATGCACGACTCGCATGCGTGGCTTACATATCGGATCAATCCACCGATTCTGCCATTGAGGATCCTTCTCGTCTGACCTCCATAGAGGATCACTTGACAACTGTACTGCGTGCCACCACCAATCGTAATGGTGATGGCACGAGCACTCGTCCAGATGTCAAAACCTCAGAGTTTTTGGGAGGAGAAGGGAACATGACTAGTGTGGAAAGGAGGTTGCACCAGCTTATGCTTTCAGTTAGGGACTTTGAGGCTCCCTCTTCTCCGAAAGAGATGAAGGGAAGGAAAAGAATGGTGACAATTGAAAGTTGTGAACAAAAGGGGTATTCAATAGTGAACATTGAGTGTAAGGATCGTCCCAGGCTCATGTTTGATACCGTTTGCACGTTAACAGACATGCAGTACGTGATTTTCCATGCTTCCATAAGTTCTCATGGAGGCTATGCATTTCAGGAGTATTTTATCAGGCACGTAGATGGATATGCTTTAGATACGGCAAGTGAAAAGGAACGAGTAATAAAATGCTTAGAGGCAGCCATAGAACGCCGGGTTTGTGAGGGAGTTAGGTTAGAGTTGTGTGCAGAGAATAGAGTAGGGTTACTGTCGGACATAACACGAGTACTGCGAGAGAATGGGCTGGTGGTTGTTCGAGCAGACGTTGAAACGCATGGAGAGAAATCCGTGAACGCTTTCTATGTGAAGGACATATCAGGGAACGAGGTTGATGTAGAGTACTTCAGCAACTCCGTGAAGAGGGAGATGGGTCCAATCGTCACACTCCATGTCAAGAATGACACCACCAGAAGAAAAACACCTTCAAAATCTTCTCCTTCTCTCTCCTTTGGAGGCATGCTAAGATCTCGGATCGAACGTCTTTCTCATGGCTTCATTATATGA 1446 0.4495 MNNTVCSPYFDPDFDTLPERLYGPPCRVCIDNDSMKGCTVVKVDSVNKEGLLLEVVQVLTDMNLQICKSYISCDAGWFMDVFHVRDENGNKLTDQKAINEIQQALGKSRASPPSQQYSNVNSVITTMTNYKTYSKKFIPLLSNSTDQYTAIEMTGTDRPGLFSEISAALVDLRCNIVEVHAWSHNARLACVAYISDQSTDSAIEDPSRLTSIEDHLTTVLRATTNRNGDGTSTRPDVKTSEFLGGEGNMTSVERRLHQLMLSVRDFEAPSSPKEMKGRKRMVTIESCEQKGYSIVNIECKDRPRLMFDTVCTLTDMQYVIFHASISSHGGYAFQEYFIRHVDGYALDTASEKERVIKCLEAAIERRVCEGVRLELCAENRVGLLSDITRVLRENGLVVVRADVETHGEKSVNAFYVKDISGNEVDVEYFSNSVKREMGPIVTLHVKNDTTRRKTPSKSSPSLSFGGMLRSRIERLSHGFII 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02619 481 ProSiteProfiles ACT domain profile. 372 448 IPR002912 -
Vimu1g02619 481 SUPERFAMILY ACT-like 369 421 IPR045865 -
Vimu1g02619 481 SUPERFAMILY ACT-like 291 361 IPR045865 -
Vimu1g02619 481 ProSiteProfiles ACT domain profile. 150 230 IPR002912 -
Vimu1g02619 481 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 12 445 IPR040217 -
Vimu1g02619 481 MobiDBLite consensus disorder prediction 224 244 - -
Vimu1g02619 481 Pfam ACT domain 372 421 IPR002912 -
Vimu1g02619 481 CDD ACT_ACR_3 292 366 - -
Vimu1g02619 481 SUPERFAMILY ACT-like 35 106 IPR045865 -
Vimu1g02619 481 SUPERFAMILY ACT-like 145 219 IPR045865 -
Vimu1g02619 481 MobiDBLite consensus disorder prediction 224 238 - -
Vimu1g02619 481 CDD ACT_ACR_2 149 222 - -
Vimu1g02619 481 Pfam ACT domain 151 200 - -
Vimu1g02619 481 Gene3D - 144 227 - -
Vimu1g02619 481 ProSiteProfiles ACT domain profile. 40 122 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02619 Vimu-Chr1 37838387 37843742 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02619 - - gmx:100820595 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02619 1 37838387 37843742 Vimu1g02619 1 37838387 37843742 ECH