Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02604 ATGAGTGAAAATGGGTGTGAAAGATCCAAAGTCACTGGTTGCCTTGATCAAGATACATACAATTTGCTTCTATTAAAGAGTTTCATCACAGAAATGTGTTCTAGGGGTTGCTTTCAAGCACCGTTGGTTAGATGCTATGTGAAGAAACCCTCATGTTCAGTGTTTTGTGGTGCTTGGTTTCGTGTTCTTGTGCTCTCTTTCATGGATAAGTTAAAGCTCAAATGCAATGGGATTTTCTGTATTTGCTCTTCCCTAGTGATAGCATATATCTGTAGCAGTGAGCCTTGTAGCTGTTCTAGGCACAGGTATGGTGATAAGTGCTATAAACCGAGTGGAACATTCATGCTAGGGATTACTTCAATGGATAAAGCTTCTAAAGGACTAAGAGCTCAAGAACAAACAGTGACTAAAATGGAAGGATCAGATGGCTTCTGGAGCAGCAGCACTTTTGAACTAGACCACAGTGAAGGTCACTCGCAGAGAAGCATCTCATCAATCGGAATATCGAATAATCCTTCTGATCCTCGAAGTAGTGGAGGCAGTCAAAGTGGTCTTCCTGAATTTGTCAACCATGGCAAGTTTGCTGTTCATTATGTTCATAATCTGTTGAAAAGTTTGATCCATGCAGGGCTTCTTCTCTGGAACCAGATAAGGCAACAATGGGTAGGAAAGAAAGGGTCTGAGAGTATCACAGAAATTCAAGAACCAAGAATAAGTTCCAATGCAACCTATGACACCTTACTTGGGAGCAACAAGCCCTTTTCCCAACGCATTCCTTTGAGAGAAATGGTTGATTTTCTTGTTGATATTTGGGATCAAGAGGGTTTGTATGACTGA 837 0.411 MSENGCERSKVTGCLDQDTYNLLLLKSFITEMCSRGCFQAPLVRCYVKKPSCSVFCGAWFRVLVLSFMDKLKLKCNGIFCICSSLVIAYICSSEPCSCSRHRYGDKCYKPSGTFMLGITSMDKASKGLRAQEQTVTKMEGSDGFWSSSTFELDHSEGHSQRSISSIGISNNPSDPRSSGGSQSGLPEFVNHGKFAVHYVHNLLKSLIHAGLLLWNQIRQQWVGKKGSESITEIQEPRISSNATYDTLLGSNKPFSQRIPLREMVDFLVDIWDQEGLYD 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02604 278 PANTHER OS07G0479600 PROTEIN 117 278 - -
Vimu1g02604 278 MobiDBLite consensus disorder prediction 161 184 - -
Vimu1g02604 278 Pfam Protein of unknown function (DUF4050) 148 233 IPR025124 -
Vimu1g02604 278 Pfam Protein of unknown function (DUF4050) 238 278 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02604 Vimu-Chr1 37596049 37599985 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02604 - - pvu:PHAVU_001G051400g 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02604 1 37596049 37599985 Vimu1g02604 1 37596049 37599985 ECH
Vimu7g01027 7 10000413 10001772 Vimu1g02604 1 37596049 37599985 ECH