Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02597 ATGAGAAGAATATGGAATCTTCTCTCCAAATCCAAACAACTAGCGGCGTTTTCAAGCCCAGCCTCCAAGTTCCGCGTCACTGCGTTTCGCTCTTATTGCGATCAATCGTATCGGCAGAACCGTCCAGGGCCGCTTGTTCAGTACAAAAGTCTAGTTGATCAAGGGAAGTTGCAGTATGATCCTTACCAAGAGAGTGTTGCTTCAGAGCTTGAGAGTTTGCTTGCCAGGTTGGAGCAGTATGAGAAAGATATGGAGGAGTATCATGTGAATCTAGCTAATTGGGAGAAGCAGCGGGAGAATGAGCGGCGGAGACTTCTTACGGAGGAAGTTGAGCTGCACCAGAAGGATGAGGACTGGTGGAAGCGGTTGAACAATAAGCTTACTGAAAGATGGACATCCCGGAAAAGACCTGCGAATATGGAGCCAGGGGTGGGAAAATGGGTATCGTATCTTAAACGTGAGAAGAAGTTGGATTCACTTGTTGGTCGTCGTCCAACTGCTCCCCCAGCTCCTAAAGGACTTTACATATATGGCAATGTTGGCAGCGGGAAGACAATGTTGATGGACATGTTCTATAGTTCTACTAAAGGAATTGTAAAACATCGAAGAAGGTATCACTTTCATGAGGCAATGCTCAGAATTAATGAACATATGCACAAGATATGGAAGAGCCAAATGGAAGAGAAGCCTTTGCAATCGGCTGTTGCTGGTTGGATTATGAGTCTTCCATTTGATATGAAAGCTAAGGAGTGGTTGGCTGCTGAGGAAAGATACAAGCAAGAGATGCAAATAAAGAACATTCTTCCAGCTGTAGCAGATAAATTTTTCCTGGATGGAGAAGAAAATGAAAAAGGAGCTAGCATTTTGTGCTTTGATGAGATACAGACTGTTGATGTATTTGCTATTGTGGCTTTATCTGGAATTCTAAGCAGATTGCTGAGCAGTGGAACTATAATTGTGGCTACCAGTAATCGAGCACCAAGCGACTTAAATGAGGCTGGTATGCAAAAAGAAATATTTCAGAAACTTGTCTCCAAATTGGAAGACCATTGTGAGAAGGTATTGATAGGGAGCGAAATTGACTACCGTCGTTTTATAGCACAAAAATCAGAAAACCAGGTGCACTTTTTCTGGCCTATTGGAAAGGAAGCAACCAATGAATTTGAGAAAAAGTGGCATGAACTAACAAGCAGATTGGGAGGAAGAATAGTTTCCAACACCACCATCTCAGTGATGTTTGGAAGGACACTTGAGGTTCCCAAAAGCTTTGATGGAGTTGCACGCTTTACATTTGAATATCTTTGTGGTCGTCCGGGTAGTGAGGGTAGAGGGAACGGAGGAATGTTTAACCTGAAGTATGAAAGAAGGGAGAAGGCTAAGTTGAGTGGAAATCTAGTTGAAGAAAGGTTGGGTGCAGCAGATTATATTGCAGTTGCCGAAAACTTTCACACTGTGTTCATATCTGATATTCCAGTAATGAGTATGCGCATCCGTGACAAGGCACGGAGATTTATTACCCTTATTGATGAGTTATACAATCATCATTGCTGCCTATATTGTTTGGCATCCTCTTCAATTGATGAATTATTTCAAGGAACCGAGGAGGGCACACTTTTTGACTTGGAAAGTTTCCAGTTCGAAACAGAGATTGATGGTGGGAAACTTCGTCGCAATGTCTTGGCAGAAGGCAGGGTGAGCTCAGCAGGTGCCCCTTCTAGTATCACATCCATACTATCTGGTCAAGAAGAGTTGTTTGCTTTTCACAGAGCAGTCTCACGGCTGATTGAAATGCAAACTCCATTATACTTGGATGGAGTTAGTAATTTCCACCCCTATTTTCAGAGGCAATATAAACAGTCACAACAATTGTGA 1872 0.4284 MRRIWNLLSKSKQLAAFSSPASKFRVTAFRSYCDQSYRQNRPGPLVQYKSLVDQGKLQYDPYQESVASELESLLARLEQYEKDMEEYHVNLANWEKQRENERRRLLTEEVELHQKDEDWWKRLNNKLTERWTSRKRPANMEPGVGKWVSYLKREKKLDSLVGRRPTAPPAPKGLYIYGNVGSGKTMLMDMFYSSTKGIVKHRRRYHFHEAMLRINEHMHKIWKSQMEEKPLQSAVAGWIMSLPFDMKAKEWLAAEERYKQEMQIKNILPAVADKFFLDGEENEKGASILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPSDLNEAGMQKEIFQKLVSKLEDHCEKVLIGSEIDYRRFIAQKSENQVHFFWPIGKEATNEFEKKWHELTSRLGGRIVSNTTISVMFGRTLEVPKSFDGVARFTFEYLCGRPGSEGRGNGGMFNLKYERREKAKLSGNLVEERLGAADYIAVAENFHTVFISDIPVMSMRIRDKARRFITLIDELYNHHCCLYCLASSSIDELFQGTEEGTLFDLESFQFETEIDGGKLRRNVLAEGRVSSAGAPSSITSILSGQEELFAFHRAVSRLIEMQTPLYLDGVSNFHPYFQRQYKQSQQL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02597 623 PANTHER ATPASE N2B 33 604 IPR005654 GO:0005524|GO:0016887
Vimu1g02597 623 Gene3D - 163 364 IPR027417 -
Vimu1g02597 623 FunFam AFG1-like ATPase isoform C 163 364 - -
Vimu1g02597 623 Coils Coil 63 116 - -
Vimu1g02597 623 Pfam AFG1-like ATPase 156 439 IPR005654 GO:0005524|GO:0016887
Vimu1g02597 623 Pfam AFG1-like ATPase 465 534 IPR005654 GO:0005524|GO:0016887
Vimu1g02597 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 347 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02597 Vimu-Chr1 37494991 37512005 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02597 - - mtr:11431777 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02597 1 37494991 37512005 Vimu1g02597 1 37494991 37512005 ECH